RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ANKRD13DQ6ZTN6 518 aa21.2■□□□□ 0.98
CLTA-203ENST00000396603 AIDAQ96BJ3 306 aa21.2■□□□□ 0.98
CLTA-203ENST00000396603 ISCA1Q9BUE6 129 aa21.2■□□□□ 0.98
CLTA-203ENST00000396603 LAMB2P55268 1798 aa21.2■□□□□ 0.98
CLTA-203ENST00000396603 TCERG1O14776 1098 aaKnown RBP21.19■□□□□ 0.98
CLTA-203ENST00000396603 HCLS1P14317 486 aaPredicted RBP21.19■□□□□ 0.98
CLTA-203ENST00000396603 CTCFP49711 727 aaPredicted RBP21.19■□□□□ 0.98
CLTA-203ENST00000396603 CALD1Q05682 793 aaKnown RBP21.19■□□□□ 0.98
CLTA-203ENST00000396603 NECTIN2Q92692 538 aa21.19■□□□□ 0.98
CLTA-203ENST00000396603 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
CLTA-203ENST00000396603 CXCL9Q07325 125 aa21.18■□□□□ 0.98
CLTA-203ENST00000396603 SF3B3Q15393 1217 aaKnown RBP21.18■□□□□ 0.98
CLTA-203ENST00000396603 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
CLTA-203ENST00000396603 CHMP4AQ9BY43 222 aa21.18■□□□□ 0.98
CLTA-203ENST00000396603 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
CLTA-203ENST00000396603 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
CLTA-203ENST00000396603 FOXN1O15353 648 aa21.17■□□□□ 0.98
CLTA-203ENST00000396603 MAP2K1Q02750 393 aaPredicted RBP21.17■□□□□ 0.98
CLTA-203ENST00000396603 TNIP1Q15025 636 aa21.17■□□□□ 0.98
CLTA-203ENST00000396603 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
CLTA-203ENST00000396603 ZNF853P0CG23 659 aa21.16■□□□□ 0.98
CLTA-203ENST00000396603 HSP90B1P14625 803 aaKnown RBP21.16■□□□□ 0.98
CLTA-203ENST00000396603 CIAPIN1Q6FI81 312 aa21.16■□□□□ 0.98
CLTA-203ENST00000396603 SLC51AQ86UW1 340 aa21.16■□□□□ 0.98
CLTA-203ENST00000396603 ZC3H15Q8WU90 426 aaKnown RBP21.16■□□□□ 0.98
CLTA-203ENST00000396603 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
CLTA-203ENST00000396603 PGAP2Q9UHJ9 254 aa21.16■□□□□ 0.98
CLTA-203ENST00000396603 THSD7BQ9C0I4 1608 aa21.15■□□□□ 0.98
CLTA-203ENST00000396603 WDR33Q9C0J8 1336 aaKnown RBP21.15■□□□□ 0.98
CLTA-203ENST00000396603 ECE1P42892 770 aa21.15■□□□□ 0.98
CLTA-203ENST00000396603 DUSP27Q5VZP5 1158 aa21.15■□□□□ 0.98
CLTA-203ENST00000396603 IFT57Q9NWB7 429 aa21.15■□□□□ 0.98
CLTA-203ENST00000396603 ABT1Q9ULW3 272 aaKnown RBP21.15■□□□□ 0.98
CLTA-203ENST00000396603 MBIPQ9NS73 344 aa21.14■□□□□ 0.97
CLTA-203ENST00000396603 DDX60Q8IY21 1712 aaKnown RBP21.14■□□□□ 0.97
CLTA-203ENST00000396603 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.97
CLTA-203ENST00000396603 GNAI1P63096 354 aa21.13■□□□□ 0.97
CLTA-203ENST00000396603 GMPSP49915 693 aaPredicted RBP21.12■□□□□ 0.97
CLTA-203ENST00000396603 HHIPL1Q96JK4 782 aa21.12■□□□□ 0.97
CLTA-203ENST00000396603 TLL2Q9Y6L7 1015 aa21.12■□□□□ 0.97
CLTA-203ENST00000396603 GOLGA2Q08379 1002 aa21.11■□□□□ 0.97
CLTA-203ENST00000396603 DPF2Q92785 391 aa21.11■□□□□ 0.97
CLTA-203ENST00000396603 FAM89AQ96GI7 184 aa21.11■□□□□ 0.97
CLTA-203ENST00000396603 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
CLTA-203ENST00000396603 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
CLTA-203ENST00000396603 CST9Q5W186 159 aa21.1■□□□□ 0.97
CLTA-203ENST00000396603 ZBTB38Q8NAP3 1195 aaPredicted RBP21.1■□□□□ 0.97
CLTA-203ENST00000396603 EYA3Q99504 573 aa21.1■□□□□ 0.97
CLTA-203ENST00000396603 TRPM7Q96QT4 1865 aa21.09■□□□□ 0.97
CLTA-203ENST00000396603 RIC3Q7Z5B4 369 aa21.09■□□□□ 0.97
CLTA-203ENST00000396603 YDJCA8MPS7 323 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 ATP5J2-PTCD1G3V325 749 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 H7C1D1 291 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 IRS4O14654 1257 aaPredicted RBP21.08■□□□□ 0.97
CLTA-203ENST00000396603 RAD17O75943 681 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 RPS12P25398 132 aaKnown RBP21.08■□□□□ 0.97
CLTA-203ENST00000396603 MAP2K2P36507 400 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 CCDC191Q8NCU4 936 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 CELF1Q92879 486 aaKnown RBP21.08■□□□□ 0.97
CLTA-203ENST00000396603 CAPNS2Q96L46 248 aa21.08■□□□□ 0.97
CLTA-203ENST00000396603 NSFL1CQ9UNZ2 370 aaKnown RBP21.08■□□□□ 0.97
CLTA-203ENST00000396603 APAF1O14727 1248 aa21.07■□□□□ 0.96
CLTA-203ENST00000396603 CAPN15O75808 1086 aa21.07■□□□□ 0.96
CLTA-203ENST00000396603 RPS8P62241 208 aaKnown RBP21.07■□□□□ 0.96
CLTA-203ENST00000396603 CDC37L1Q7L3B6 337 aa21.07■□□□□ 0.96
CLTA-203ENST00000396603 PODXL2Q9NZ53 605 aa21.07■□□□□ 0.96
CLTA-203ENST00000396603 CNOT7Q9UIV1 285 aaKnown RBP21.07■□□□□ 0.96
CLTA-203ENST00000396603 TRAF5O00463 557 aa21.06■□□□□ 0.96
CLTA-203ENST00000396603 DDX58O95786 925 aaKnown RBP21.06■□□□□ 0.96
CLTA-203ENST00000396603 SAPCD2Q86UD0 394 aa21.06■□□□□ 0.96
CLTA-203ENST00000396603 BEGAINQ9BUH8 593 aa21.06■□□□□ 0.96
CLTA-203ENST00000396603 HSPA8P11142 646 aaKnown RBP21.05■□□□□ 0.96
CLTA-203ENST00000396603 LBX1P52954 281 aa21.05■□□□□ 0.96
CLTA-203ENST00000396603 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
CLTA-203ENST00000396603 ZNF609O15014 1411 aa21.04■□□□□ 0.96
CLTA-203ENST00000396603 CA12O43570 354 aa21.04■□□□□ 0.96
CLTA-203ENST00000396603 CELF2O95319 508 aaKnown RBP21.04■□□□□ 0.96
CLTA-203ENST00000396603 PCCAP05165 728 aaPredicted RBP21.04■□□□□ 0.96
CLTA-203ENST00000396603 HIRAP54198 1017 aaPredicted RBP21.04■□□□□ 0.96
CLTA-203ENST00000396603 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
CLTA-203ENST00000396603 MICALL2Q8IY33 904 aa21.04■□□□□ 0.96
CLTA-203ENST00000396603 POLLQ9UGP5 575 aa21.04■□□□□ 0.96
CLTA-203ENST00000396603 C6orf229H3BNL8 230 aa21.03■□□□□ 0.96
CLTA-203ENST00000396603 GPSM2P81274 684 aa21.03■□□□□ 0.96
CLTA-203ENST00000396603 FMR1Q06787 632 aaKnown RBP eCLIP21.03■□□□□ 0.96
CLTA-203ENST00000396603 CCDC152Q4G0S7 254 aa21.03■□□□□ 0.96
CLTA-203ENST00000396603 TBC1D16Q8TBP0 767 aa21.03■□□□□ 0.96
CLTA-203ENST00000396603 PSMD14O00487 310 aa21.02■□□□□ 0.96
CLTA-203ENST00000396603 PDE8AO60658 829 aa21.02■□□□□ 0.96
CLTA-203ENST00000396603 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 CYP4F22Q6NT55 531 aa21.02■□□□□ 0.96
CLTA-203ENST00000396603 PAXIP1Q6ZW49 1069 aaPredicted RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 TRPM4Q8TD43 1214 aa21.02■□□□□ 0.96
CLTA-203ENST00000396603 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 GLIS2Q9BZE0 524 aaPredicted RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 PHAXQ9H814 394 aaKnown RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 CWC25Q9NXE8 425 aaPredicted RBP21.02■□□□□ 0.96
CLTA-203ENST00000396603 TAF1P21675 1872 aa21.02■□□□□ 0.96
CLTA-203ENST00000396603 ECE2O60344 883 aa21.01■□□□□ 0.95
CLTA-203ENST00000396603 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms