RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 AMPHP49418 695 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 NAP1L2Q9ULW6 460 aaPredicted RBP11.64□□□□□ -0.55
TRIM39-203ENST00000396547 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
TRIM39-203ENST00000396547 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
TRIM39-203ENST00000396547 CDK11BP21127 795 aaKnown RBP11.64□□□□□ -0.55
TRIM39-203ENST00000396547 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 FEZ1Q99689 392 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 PA2G4Q9UQ80 394 aaKnown RBP11.64□□□□□ -0.55
TRIM39-203ENST00000396547 USP16Q9Y5T5 823 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
TRIM39-203ENST00000396547 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
TRIM39-203ENST00000396547 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
TRIM39-203ENST00000396547 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
TRIM39-203ENST00000396547 ZBTB9Q96C00 473 aa11.63□□□□□ -0.55
TRIM39-203ENST00000396547 CCDC9Q9Y3X0 531 aaKnown RBP11.63□□□□□ -0.55
TRIM39-203ENST00000396547 BECN2A8MW95 431 aa11.63□□□□□ -0.55
TRIM39-203ENST00000396547 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
TRIM39-203ENST00000396547 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
TRIM39-203ENST00000396547 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
TRIM39-203ENST00000396547 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
TRIM39-203ENST00000396547 ST3GAL1Q11201 340 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 ZNF772Q68DY9 489 aaPredicted RBP11.62□□□□□ -0.55
TRIM39-203ENST00000396547 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 ELF2Q15723 593 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 RUFY2Q8WXA3 655 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 RBM8AQ9Y5S9 174 aaKnown RBP11.62□□□□□ -0.55
TRIM39-203ENST00000396547 ACEP12821 1306 aa11.62□□□□□ -0.55
TRIM39-203ENST00000396547 SKILP12757 684 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
TRIM39-203ENST00000396547 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
TRIM39-203ENST00000396547 H3BQV1 296 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 IFFO2Q5TF58 517 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 CLASRPQ8N2M8 674 aaKnown RBP11.61□□□□□ -0.55
TRIM39-203ENST00000396547 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
TRIM39-203ENST00000396547 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 GLI3P10071 1580 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 OVOS2A0A0J9YW53 1432 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 JAK2O60674 1132 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 OVOS2Q6IE36 1432 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 SIL1Q9H173 461 aa11.61□□□□□ -0.55
TRIM39-203ENST00000396547 DDX41Q9UJV9 622 aaKnown RBP11.61□□□□□ -0.55
TRIM39-203ENST00000396547 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 KIF18AQ8NI77 898 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-203ENST00000396547 PARP4Q9UKK3 1724 aaKnown RBP11.6□□□□□ -0.55
TRIM39-203ENST00000396547 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 AACSQ86V21 672 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-203ENST00000396547 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
TRIM39-203ENST00000396547 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 BLOC1S2Q6QNY1 142 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 KRT222Q8N1A0 295 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 GTF3C6Q969F1 213 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 EYA1Q99502 592 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 GUCY1B3Q02153 619 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 NMIQ13287 307 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
TRIM39-203ENST00000396547 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-203ENST00000396547 LTN1O94822 1766 aa11.58□□□□□ -0.55
TRIM39-203ENST00000396547 CRB1P82279 1406 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 LRRC8AQ8IWT6 810 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 SCAND2PQ9GZW5 306 aaPredicted RBP11.58□□□□□ -0.56
TRIM39-203ENST00000396547 FBXO38Q6PIJ6 1188 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
TRIM39-203ENST00000396547 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 CLSTN2Q9H4D0 955 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
TRIM39-203ENST00000396547 PDCP20941 246 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 TERF2Q15554 542 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
TRIM39-203ENST00000396547 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 POLR3GO15318 223 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-203ENST00000396547 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
TRIM39-203ENST00000396547 ECHDC1Q9NTX5 307 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 PLEKHG2Q9H7P9 1386 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 ERCC6LQ2NKX8 1250 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms