RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZNF215Q9UL58 517 aaPredicted RBP9.87□□□□□ -0.83
NDE1-202ENST00000396355 TECPR2O15040 1411 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 ZBTB7AO95365 584 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 SSBP05455 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
NDE1-202ENST00000396355 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 CREBRFQ8IUR6 639 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 IPO8O15397 1037 aaKnown RBP9.87□□□□□ -0.83
NDE1-202ENST00000396355 SATB1Q01826 763 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 LTV1Q96GA3 475 aaPredicted RBP9.87□□□□□ -0.83
NDE1-202ENST00000396355 ZCCHC17Q9NP64 241 aaKnown RBP9.87□□□□□ -0.83
NDE1-202ENST00000396355 STK32BQ9NY57 414 aa9.87□□□□□ -0.83
NDE1-202ENST00000396355 TOPAZ1Q8N9V7 1692 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 KRT24Q2M2I5 525 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 TTC19Q6DKK2 380 aaPredicted RBP9.86□□□□□ -0.83
NDE1-202ENST00000396355 CKAP2LQ8IYA6 745 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 KIF2CQ99661 725 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 PYCARDQ9ULZ3 195 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 GBP2P32456 591 aaPredicted RBP9.86□□□□□ -0.83
NDE1-202ENST00000396355 RNF187Q5TA31 235 aaPredicted RBP9.86□□□□□ -0.83
NDE1-202ENST00000396355 KIF4AO95239 1232 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 GCKP35557 465 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 AP1ARQ63HQ0 302 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 DYDC1Q8WWB3 177 aa9.86□□□□□ -0.83
NDE1-202ENST00000396355 KAT6BQ8WYB5 2073 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 NALCNQ8IZF0 1738 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 COL16A1Q07092 1604 aaPredicted RBP9.85□□□□□ -0.83
NDE1-202ENST00000396355 SMTNL1A8MU46 457 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
NDE1-202ENST00000396355 RBM28Q9NW13 759 aaKnown RBP9.85□□□□□ -0.83
NDE1-202ENST00000396355 CCDC61Q9Y6R9 512 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 LIG3P49916 1009 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 MAP2K1Q02750 393 aaPredicted RBP9.85□□□□□ -0.83
NDE1-202ENST00000396355 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
NDE1-202ENST00000396355 DDIT3P35638 169 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 LRMPQ12912 555 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 ERCC6LQ2NKX8 1250 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 PAXBP1Q9Y5B6 917 aa9.85□□□□□ -0.83
NDE1-202ENST00000396355 EXOC5O00471 708 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 ATP2C2O75185 946 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 CCDC192P0DO97 292 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 NCBP1Q09161 790 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 ZGPATQ8N5A5 531 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 ZNF428Q96B54 188 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 DTNBO60941 627 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 SMC2O95347 1197 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 GNAI1P63096 354 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 PPARDQ03181 441 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 LARP1Q6PKG0 1096 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 RNF217Q8TC41 542 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 SLU7O95391 586 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 CASTP20810 708 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 OAS2P29728 719 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 PKP1Q13835 747 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 BMP2KLQ5H9B9 411 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 ARHGAP45Q92619 1136 aa9.84□□□□□ -0.83
NDE1-202ENST00000396355 JPH2Q9BR39 696 aaPredicted RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 DDX41Q9UJV9 622 aaKnown RBP9.84□□□□□ -0.83
NDE1-202ENST00000396355 CLNS1AP54105 237 aaKnown RBP9.83□□□□□ -0.84
NDE1-202ENST00000396355 RILPL2Q969X0 211 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 COG3Q96JB2 828 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
NDE1-202ENST00000396355 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 DIP2AQ14689 1571 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 FOSBP53539 338 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 ZNF445P59923 1031 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 ANO2Q9NQ90 1003 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 ATP10DQ9P241 1426 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 CTNNA3Q9UI47 895 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 MRFAP1Q9Y605 127 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 AHDC1Q5TGY3 1603 aaPredicted RBP9.83□□□□□ -0.84
NDE1-202ENST00000396355 CEBPZQ03701 1054 aaKnown RBP9.83□□□□□ -0.84
NDE1-202ENST00000396355 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
NDE1-202ENST00000396355 PDILTQ8N807 584 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 ACSBG1Q96GR2 724 aa9.83□□□□□ -0.84
NDE1-202ENST00000396355 IVLP07476 585 aa9.82□□□□□ -0.84
NDE1-202ENST00000396355 GSPT1P15170 499 aaKnown RBP9.82□□□□□ -0.84
NDE1-202ENST00000396355 G3BP2Q9UN86 482 aaKnown RBP9.82□□□□□ -0.84
NDE1-202ENST00000396355 ATRNO75882 1429 aa9.82□□□□□ -0.84
NDE1-202ENST00000396355 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
NDE1-202ENST00000396355 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
NDE1-202ENST00000396355 ACEP12821 1306 aa9.82□□□□□ -0.84
NDE1-202ENST00000396355 TNS3Q68CZ2 1445 aa9.82□□□□□ -0.84
NDE1-202ENST00000396355 RGPD8O14715 1765 aaPredicted RBP9.81□□□□□ -0.84
NDE1-202ENST00000396355 GUCY2CP25092 1073 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 RABEP1Q15276 862 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 SLC4A10Q6U841 1118 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 MRFAP1L1Q96HT8 127 aa9.81□□□□□ -0.84
NDE1-202ENST00000396355 SCLT1Q96NL6 688 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms