RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
PPP3CA-202ENST00000394853 MPHOSPH8Q99549 860 aa16.93■□□□□ 0.3
PPP3CA-202ENST00000394853 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
PPP3CA-202ENST00000394853 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 SMIM5Q71RC9 77 aa16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 ZGPATQ8N5A5 531 aaKnown RBP16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 MCM4P33991 863 aa16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 TNPO1Q92973 898 aaKnown RBP16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 FAM89AQ96GI7 184 aa16.92■□□□□ 0.3
PPP3CA-202ENST00000394853 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 SGSM2O43147 1006 aa16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
PPP3CA-202ENST00000394853 PALLDQ8WX93 1383 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 SSFA2P28290 1259 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 RFX5P48382 616 aaPredicted RBP16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 CASP7P55210 303 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 VPS37DQ86XT2 251 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 ARID3AQ99856 593 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
PPP3CA-202ENST00000394853 H7C1W4 665 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 COPRSQ9NQ92 184 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 FOXO4P98177 505 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 PKP1Q13835 747 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 HLFQ16534 295 aa16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 BCCIPQ9P287 314 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
PPP3CA-202ENST00000394853 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 CHGBP05060 677 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 CPA1P15085 419 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 TIMM10P62072 90 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 DTNBO60941 627 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 DDIT3P35638 169 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 PTH1RQ03431 593 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 LRRC24Q50LG9 513 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 EVI5LQ96CN4 794 aa16.88■□□□□ 0.29
PPP3CA-202ENST00000394853 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 SECISBP2LQ93073 1101 aaKnown RBP16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 PUS3Q9BZE2 481 aaKnown RBP16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 ZNF592Q92610 1267 aa16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
PPP3CA-202ENST00000394853 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 GLI3P10071 1580 aa16.86■□□□□ 0.29
PPP3CA-202ENST00000394853 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 HSPA4P34932 840 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 AFDNP55196 1824 aaKnown RBP16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
PPP3CA-202ENST00000394853 RAD50Q92878 1312 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 TPTE2Q6XPS3 522 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 LDHAL6AQ6ZMR3 332 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
PPP3CA-202ENST00000394853 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.29
PPP3CA-202ENST00000394853 SLFNL1Q499Z3 407 aa16.83■□□□□ 0.29
PPP3CA-202ENST00000394853 CIZ1Q9ULV3 898 aaPredicted RBP16.83■□□□□ 0.29
PPP3CA-202ENST00000394853 TOGARAM1Q9Y4F4 1720 aa16.83■□□□□ 0.29
PPP3CA-202ENST00000394853 IRS4O14654 1257 aaPredicted RBP16.83■□□□□ 0.28
PPP3CA-202ENST00000394853 TRAK2O60296 914 aa16.83■□□□□ 0.28
PPP3CA-202ENST00000394853 IGHMBP2P38935 993 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms