RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 VPS53Q5VIR6 699 aa22.36■■□□□ 1.17
SIL1-202ENST00000394817 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
SIL1-202ENST00000394817 ZKSCAN1P17029 563 aaPredicted RBP22.35■■□□□ 1.17
SIL1-202ENST00000394817 ADCK5Q3MIX3 580 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 CREB3L3Q68CJ9 461 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 JAKMIP1Q96N16 626 aaKnown RBP22.35■■□□□ 1.17
SIL1-202ENST00000394817 ANKRD36CQ5JPF3 1778 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 GAS2L3Q86XJ1 694 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 NGLY1Q96IV0 654 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 TEX13AQ9BXU3 409 aaPredicted RBP22.35■■□□□ 1.17
SIL1-202ENST00000394817 BCL9LQ86UU0 1499 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 SPEF2Q9C093 1822 aa22.35■■□□□ 1.17
SIL1-202ENST00000394817 PRIM1P49642 420 aaKnown RBP22.34■■□□□ 1.17
SIL1-202ENST00000394817 ATG9AQ7Z3C6 839 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 DBNDD2Q9BQY9 259 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 PANK2Q9BZ23 570 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 GPR108Q9NPR9 543 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 CYP46A1Q9Y6A2 500 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 TCHHQ07283 1943 aa22.34■■□□□ 1.17
SIL1-202ENST00000394817 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.17
SIL1-202ENST00000394817 MARCH10Q8NA82 808 aaPredicted RBP22.33■■□□□ 1.17
SIL1-202ENST00000394817 HAUS7Q99871 368 aa22.33■■□□□ 1.17
SIL1-202ENST00000394817 WDR33Q9C0J8 1336 aaKnown RBP22.33■■□□□ 1.17
SIL1-202ENST00000394817 ZNF609O15014 1411 aa22.33■■□□□ 1.17
SIL1-202ENST00000394817 PRPF40AO75400 957 aaKnown RBP22.33■■□□□ 1.16
SIL1-202ENST00000394817 CPA1P15085 419 aa22.33■■□□□ 1.16
SIL1-202ENST00000394817 BARGINQ6ZT62 677 aa22.33■■□□□ 1.16
SIL1-202ENST00000394817 EDC3Q96F86 508 aaKnown RBP22.33■■□□□ 1.16
SIL1-202ENST00000394817 PDRG1Q9NUG6 133 aa22.33■■□□□ 1.16
SIL1-202ENST00000394817 SLC27A2O14975 620 aa22.32■■□□□ 1.16
SIL1-202ENST00000394817 KCNJ4P48050 445 aa22.32■■□□□ 1.16
SIL1-202ENST00000394817 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.32■■□□□ 1.16
SIL1-202ENST00000394817 IL15P40933 162 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
SIL1-202ENST00000394817 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
SIL1-202ENST00000394817 FOXD4L5Q5VV16 416 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 FOXD4L4Q8WXT5 416 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 SLC4A9Q96Q91 983 aa22.31■■□□□ 1.16
SIL1-202ENST00000394817 ZNF445P59923 1031 aa22.31■■□□□ 1.16
SIL1-202ENST00000394817 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 ZSCAN31Q96LW9 406 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 SH2B1Q9NRF2 756 aaPredicted RBP22.31■■□□□ 1.16
SIL1-202ENST00000394817 CIAO1O76071 339 aa22.3■■□□□ 1.16
SIL1-202ENST00000394817 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
SIL1-202ENST00000394817 GPT2Q8TD30 523 aa22.3■■□□□ 1.16
SIL1-202ENST00000394817 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
SIL1-202ENST00000394817 HMG20BQ9P0W2 317 aa22.3■■□□□ 1.16
SIL1-202ENST00000394817 MYH3P11055 1940 aa22.3■■□□□ 1.16
SIL1-202ENST00000394817 A0A0G2JS52 829 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 PSMA5P28066 241 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 CAVIN1Q6NZI2 390 aaKnown RBP22.29■■□□□ 1.16
SIL1-202ENST00000394817 PALLDQ8WX93 1383 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 CHAMP1Q96JM3 812 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 EYA2O00167 538 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 TAF5LO75529 589 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 LARGE1O95461 756 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 TSGA10IPQ3SY00 556 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
SIL1-202ENST00000394817 STARD3NLO95772 234 aa22.28■■□□□ 1.16
SIL1-202ENST00000394817 VPS72Q15906 364 aa22.28■■□□□ 1.16
SIL1-202ENST00000394817 KIF6Q6ZMV9 814 aa22.28■■□□□ 1.16
SIL1-202ENST00000394817 TICAM2Q86XR7 235 aa22.28■■□□□ 1.16
SIL1-202ENST00000394817 DNAJC2Q99543 621 aaKnown RBP22.28■■□□□ 1.16
SIL1-202ENST00000394817 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
SIL1-202ENST00000394817 MBD3O95983 291 aa22.27■■□□□ 1.16
SIL1-202ENST00000394817 ZSCAN23Q3MJ62 389 aa22.27■■□□□ 1.16
SIL1-202ENST00000394817 ZNF330Q9Y3S2 320 aaPredicted RBP22.27■■□□□ 1.16
SIL1-202ENST00000394817 NCLP19338 710 aaKnown RBP22.27■■□□□ 1.16
SIL1-202ENST00000394817 KBTBD3Q8NAB2 608 aa22.27■■□□□ 1.16
SIL1-202ENST00000394817 LARP6Q9BRS8 491 aaKnown RBP22.27■■□□□ 1.16
SIL1-202ENST00000394817 RTN4Q9NQC3 1192 aaKnown RBP22.27■■□□□ 1.16
SIL1-202ENST00000394817 SMC3Q9UQE7 1217 aa22.27■■□□□ 1.16
SIL1-202ENST00000394817 NUP98P52948 1817 aa22.27■■□□□ 1.16
SIL1-202ENST00000394817 HSPA1LP34931 641 aa22.26■■□□□ 1.15
SIL1-202ENST00000394817 FNBP4Q8N3X1 1017 aaPredicted RBP22.26■■□□□ 1.15
SIL1-202ENST00000394817 PLA2G12BQ9BX93 195 aa22.26■■□□□ 1.15
SIL1-202ENST00000394817 ALDH8A1Q9H2A2 487 aaPredicted RBP22.26■■□□□ 1.15
SIL1-202ENST00000394817 NDUFB9Q9Y6M9 179 aa22.26■■□□□ 1.15
SIL1-202ENST00000394817 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
SIL1-202ENST00000394817 PCCAP05165 728 aaPredicted RBP22.25■■□□□ 1.15
SIL1-202ENST00000394817 LRRC24Q50LG9 513 aa22.25■■□□□ 1.15
SIL1-202ENST00000394817 FBXO3Q9UK99 471 aa22.25■■□□□ 1.15
SIL1-202ENST00000394817 MAP3K15Q6ZN16 1313 aa22.25■■□□□ 1.15
SIL1-202ENST00000394817 LAMA4Q16363 1823 aa22.25■■□□□ 1.15
SIL1-202ENST00000394817 FAM43AQ8N2R8 423 aa22.25■■□□□ 1.15
SIL1-202ENST00000394817 ZNF594Q96JF6 807 aaPredicted RBP22.25■■□□□ 1.15
SIL1-202ENST00000394817 ZSCAN22P10073 491 aaPredicted RBP22.24■■□□□ 1.15
SIL1-202ENST00000394817 BLOC1S2Q6QNY1 142 aa22.24■■□□□ 1.15
SIL1-202ENST00000394817 DDX46Q7L014 1031 aaKnown RBP22.24■■□□□ 1.15
SIL1-202ENST00000394817 CCDC83Q8IWF9 413 aa22.24■■□□□ 1.15
SIL1-202ENST00000394817 NEUROD6Q96NK8 337 aa22.24■■□□□ 1.15
SIL1-202ENST00000394817 STX6O43752 255 aa22.23■■□□□ 1.15
SIL1-202ENST00000394817 SYT1P21579 422 aa22.23■■□□□ 1.15
SIL1-202ENST00000394817 RPS6KB1P23443 525 aa22.23■■□□□ 1.15
SIL1-202ENST00000394817 ST3GAL1Q11201 340 aa22.23■■□□□ 1.15
SIL1-202ENST00000394817 ANKRD1Q15327 319 aa22.23■■□□□ 1.15
SIL1-202ENST00000394817 ME3Q16798 604 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms