RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 CCT4P50991 539 aaKnown RBP24.07■■□□□ 1.44
TRPT1-203ENST00000394547 CTSWP56202 376 aa24.07■■□□□ 1.44
TRPT1-203ENST00000394547 GRIPAP1Q4V328 841 aa24.07■■□□□ 1.44
TRPT1-203ENST00000394547 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
TRPT1-203ENST00000394547 CC2D2BQ6DHV5 1058 aa24.07■■□□□ 1.44
TRPT1-203ENST00000394547 TMC4Q7Z404 712 aa24.07■■□□□ 1.44
TRPT1-203ENST00000394547 RTL9Q8NET4 1388 aa24.06■■□□□ 1.44
TRPT1-203ENST00000394547 PPEF1O14829 653 aaPredicted RBP24.06■■□□□ 1.44
TRPT1-203ENST00000394547 BBOX1O75936 387 aa24.06■■□□□ 1.44
TRPT1-203ENST00000394547 JARID2Q92833 1246 aaPredicted RBP24.06■■□□□ 1.44
TRPT1-203ENST00000394547 C9orf78Q9NZ63 289 aaPredicted RBP24.06■■□□□ 1.44
TRPT1-203ENST00000394547 LRRC37AA6NMS7 1700 aa24.06■■□□□ 1.44
TRPT1-203ENST00000394547 UTYO14607 1347 aa24.06■■□□□ 1.44
TRPT1-203ENST00000394547 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
TRPT1-203ENST00000394547 SNED1Q8TER0 1413 aa24.05■■□□□ 1.44
TRPT1-203ENST00000394547 ATF7IPQ6VMQ6 1270 aa24.05■■□□□ 1.44
TRPT1-203ENST00000394547 SBF1O95248 1867 aa24.04■■□□□ 1.44
TRPT1-203ENST00000394547 RTKN2Q8IZC4 609 aa24.04■■□□□ 1.44
TRPT1-203ENST00000394547 TAF1P21675 1872 aa24.03■■□□□ 1.44
TRPT1-203ENST00000394547 ZKSCAN2Q63HK3 967 aa24.03■■□□□ 1.44
TRPT1-203ENST00000394547 TTLL11Q8NHH1 800 aa24.03■■□□□ 1.44
TRPT1-203ENST00000394547 TMX4Q9H1E5 349 aaPredicted RBP24.03■■□□□ 1.44
TRPT1-203ENST00000394547 ZNF219Q9P2Y4 722 aaPredicted RBP24.03■■□□□ 1.44
TRPT1-203ENST00000394547 NFKBIEO00221 500 aa24.02■■□□□ 1.44
TRPT1-203ENST00000394547 TRIM27P14373 513 aa24.02■■□□□ 1.44
TRPT1-203ENST00000394547 FRAT1Q92837 279 aaPredicted RBP24.02■■□□□ 1.44
TRPT1-203ENST00000394547 ATP6V0A2Q9Y487 856 aa24.02■■□□□ 1.44
TRPT1-203ENST00000394547 CSF1RP07333 972 aa24.01■■□□□ 1.43
TRPT1-203ENST00000394547 SP8Q8IXZ3 490 aa24.01■■□□□ 1.43
TRPT1-203ENST00000394547 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
TRPT1-203ENST00000394547 TAOK3Q9H2K8 898 aa24.01■■□□□ 1.43
TRPT1-203ENST00000394547 INTS3Q68E01 1043 aaKnown RBP24■■□□□ 1.43
TRPT1-203ENST00000394547 PPP4R3CPQ6ZMV5 832 aa24■■□□□ 1.43
TRPT1-203ENST00000394547 CELF1Q92879 486 aaKnown RBP24■■□□□ 1.43
TRPT1-203ENST00000394547 PSMD1Q99460 953 aa24■■□□□ 1.43
TRPT1-203ENST00000394547 COL4A1P02462 1669 aa23.99■■□□□ 1.43
TRPT1-203ENST00000394547 NBPF7P0C2Y1 421 aaPredicted RBP23.99■■□□□ 1.43
TRPT1-203ENST00000394547 LMNB1P20700 586 aa23.99■■□□□ 1.43
TRPT1-203ENST00000394547 YY1P25490 414 aa23.99■■□□□ 1.43
TRPT1-203ENST00000394547 FKBP4Q02790 459 aaKnown RBP eCLIP23.99■■□□□ 1.43
TRPT1-203ENST00000394547 RASSF7Q02833 373 aa23.99■■□□□ 1.43
TRPT1-203ENST00000394547 CDC5LQ99459 802 aaKnown RBP23.99■■□□□ 1.43
TRPT1-203ENST00000394547 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
TRPT1-203ENST00000394547 DICER1Q9UPY3 1922 aaKnown RBP23.99■■□□□ 1.43
TRPT1-203ENST00000394547 RPS8P62241 208 aaKnown RBP23.98■■□□□ 1.43
TRPT1-203ENST00000394547 FOXO4P98177 505 aa23.98■■□□□ 1.43
TRPT1-203ENST00000394547 GREM2Q9H772 168 aa23.98■■□□□ 1.43
TRPT1-203ENST00000394547 SEC31BQ9NQW1 1179 aa23.98■■□□□ 1.43
TRPT1-203ENST00000394547 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
TRPT1-203ENST00000394547 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
TRPT1-203ENST00000394547 TIAM2Q8IVF5 1701 aa23.97■■□□□ 1.43
TRPT1-203ENST00000394547 ZC3H4Q9UPT8 1303 aaKnown RBP23.97■■□□□ 1.43
TRPT1-203ENST00000394547 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
TRPT1-203ENST00000394547 OLFM4Q6UX06 510 aa23.96■■□□□ 1.43
TRPT1-203ENST00000394547 ANKRD18AQ8IVF6 992 aa23.96■■□□□ 1.43
TRPT1-203ENST00000394547 CCDC85AQ96PX6 553 aaPredicted RBP23.96■■□□□ 1.43
TRPT1-203ENST00000394547 HDAC5Q9UQL6 1122 aa23.96■■□□□ 1.43
TRPT1-203ENST00000394547 C9orf131Q5VYM1 1079 aa23.95■■□□□ 1.42
TRPT1-203ENST00000394547 SUCLG2Q96I99 432 aa23.95■■□□□ 1.42
TRPT1-203ENST00000394547 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
TRPT1-203ENST00000394547 SPEF2Q9C093 1822 aa23.95■■□□□ 1.42
TRPT1-203ENST00000394547 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
TRPT1-203ENST00000394547 ITGA6P23229 1130 aa23.94■■□□□ 1.42
TRPT1-203ENST00000394547 FAM161AQ3B820 660 aa23.94■■□□□ 1.42
TRPT1-203ENST00000394547 RABL6Q3YEC7 729 aaPredicted RBP23.94■■□□□ 1.42
TRPT1-203ENST00000394547 MS4A1P11836 297 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 PRELPP51888 382 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 EPHA10Q5JZY3 1008 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 LMBR1LQ6UX01 489 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 FTSJ3Q8IY81 847 aaKnown RBP23.93■■□□□ 1.42
TRPT1-203ENST00000394547 DZIP1LQ8IYY4 767 aaKnown RBP23.93■■□□□ 1.42
TRPT1-203ENST00000394547 SUPT20HQ8NEM7 779 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 KAZALD1Q96I82 304 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 RTFDC1Q9BY42 306 aaPredicted RBP23.93■■□□□ 1.42
TRPT1-203ENST00000394547 VPS33BQ9H267 617 aa23.93■■□□□ 1.42
TRPT1-203ENST00000394547 BSDC1Q9NW68 430 aaPredicted RBP23.93■■□□□ 1.42
TRPT1-203ENST00000394547 DUOX1Q9NRD9 1551 aa23.92■■□□□ 1.42
TRPT1-203ENST00000394547 ANKRD18BA2A2Z9 1011 aa23.92■■□□□ 1.42
TRPT1-203ENST00000394547 UBTFL1P0CB47 393 aaPredicted RBP23.92■■□□□ 1.42
TRPT1-203ENST00000394547 IGHMBP2P38935 993 aaKnown RBP23.92■■□□□ 1.42
TRPT1-203ENST00000394547 IFIT5Q13325 482 aaKnown RBP23.92■■□□□ 1.42
TRPT1-203ENST00000394547 MPNDQ8N594 471 aa23.92■■□□□ 1.42
TRPT1-203ENST00000394547 CLUAP1Q96AJ1 413 aa23.92■■□□□ 1.42
TRPT1-203ENST00000394547 GNAI3P08754 354 aa23.91■■□□□ 1.42
TRPT1-203ENST00000394547 DPP8Q6V1X1 898 aaPredicted RBP23.91■■□□□ 1.42
TRPT1-203ENST00000394547 BICC1Q9H694 974 aaKnown RBP23.91■■□□□ 1.42
TRPT1-203ENST00000394547 TNNQ9UQP3 1299 aa23.91■■□□□ 1.42
TRPT1-203ENST00000394547 CCDC57Q2TAC2 916 aa23.9■■□□□ 1.42
TRPT1-203ENST00000394547 PODXL2Q9NZ53 605 aa23.9■■□□□ 1.42
TRPT1-203ENST00000394547 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
TRPT1-203ENST00000394547 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.41
TRPT1-203ENST00000394547 SLC51AQ86UW1 340 aa23.89■■□□□ 1.41
TRPT1-203ENST00000394547 TMEM57Q8N5G2 664 aa23.89■■□□□ 1.41
TRPT1-203ENST00000394547 ANKRD44Q8N8A2 993 aa23.89■■□□□ 1.41
TRPT1-203ENST00000394547 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.88■■□□□ 1.41
TRPT1-203ENST00000394547 MPHOSPH8Q99549 860 aa23.88■■□□□ 1.41
TRPT1-203ENST00000394547 MEIS3Q99687 375 aa23.88■■□□□ 1.41
TRPT1-203ENST00000394547 ZNF277Q9NRM2 450 aaPredicted RBP23.88■■□□□ 1.41
TRPT1-203ENST00000394547 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
TRPT1-203ENST00000394547 XDHP47989 1333 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms