RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 RNF181Q9P0P0 153 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 PSME4Q14997 1843 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 LTBP1Q14766 1721 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 SNED1Q8TER0 1413 aa10.92□□□□□ -0.66
APLF-202ENST00000394342 ABCC4O15439 1325 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 IRS4O14654 1257 aaPredicted RBP10.91□□□□□ -0.66
APLF-202ENST00000394342 IGKV5-2P06315 115 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
APLF-202ENST00000394342 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 CC2D2BQ6DHV5 1058 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
APLF-202ENST00000394342 RTKN2Q8IZC4 609 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 CDCA7LQ96GN5 454 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 WDR90Q96KV7 1748 aa10.91□□□□□ -0.66
APLF-202ENST00000394342 CDHR2Q9BYE9 1310 aa10.9□□□□□ -0.66
APLF-202ENST00000394342 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
APLF-202ENST00000394342 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
APLF-202ENST00000394342 PRELPP51888 382 aa10.9□□□□□ -0.66
APLF-202ENST00000394342 SF3B3Q15393 1217 aaKnown RBP10.9□□□□□ -0.66
APLF-202ENST00000394342 COL4A1P02462 1669 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 PDE8AO60658 829 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 BBOX1O75936 387 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
APLF-202ENST00000394342 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 GRAPQ13588 217 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 ALDH1L2Q3SY69 923 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 MRPL50Q8N5N7 158 aaKnown RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 LINS1Q8NG48 757 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 GRAPLQ8TC17 118 aaPredicted RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 PSMD1Q99460 953 aa10.89□□□□□ -0.67
APLF-202ENST00000394342 TMX4Q9H1E5 349 aaPredicted RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
APLF-202ENST00000394342 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
APLF-202ENST00000394342 GCKRQ14397 625 aa10.88□□□□□ -0.67
APLF-202ENST00000394342 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
APLF-202ENST00000394342 OLFM4Q6UX06 510 aa10.88□□□□□ -0.67
APLF-202ENST00000394342 ATP6V0A2Q9Y487 856 aa10.88□□□□□ -0.67
APLF-202ENST00000394342 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
APLF-202ENST00000394342 PTPRCP08575 1304 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 DUOX1Q9NRD9 1551 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 F6X3S4 739 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 H7C1W4 665 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 CCDC152Q4G0S7 254 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 SP8Q8IXZ3 490 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
APLF-202ENST00000394342 SCN9AQ15858 1988 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 KDM2BQ8NHM5 1336 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 CEP350Q5VT06 3117 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 CTSWP56202 376 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 BEND3Q5T5X7 828 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 ZNF526Q8TF50 670 aaPredicted RBP10.86□□□□□ -0.67
APLF-202ENST00000394342 JARID2Q92833 1246 aaPredicted RBP10.86□□□□□ -0.67
APLF-202ENST00000394342 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 RTL9Q8NET4 1388 aa10.86□□□□□ -0.67
APLF-202ENST00000394342 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
APLF-202ENST00000394342 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
APLF-202ENST00000394342 CASP7P55210 303 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 UBE3BQ7Z3V4 1068 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 CELF1Q92879 486 aaKnown RBP10.85□□□□□ -0.67
APLF-202ENST00000394342 VPS33BQ9H267 617 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 ZNF277Q9NRM2 450 aaPredicted RBP10.85□□□□□ -0.67
APLF-202ENST00000394342 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 COL4A5P29400 1685 aa10.85□□□□□ -0.67
APLF-202ENST00000394342 GLTPD2A6NH11 291 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 RPS8P62241 208 aaKnown RBP10.84□□□□□ -0.67
APLF-202ENST00000394342 SLC4A10Q6U841 1118 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 MPNDQ8N594 471 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 SUPT20HQ8NEM7 779 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 TTLL11Q8NHH1 800 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 RTFDC1Q9BY42 306 aaPredicted RBP10.84□□□□□ -0.67
APLF-202ENST00000394342 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
APLF-202ENST00000394342 GRM8O00222 908 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 DPP8Q6V1X1 898 aaPredicted RBP10.83□□□□□ -0.68
APLF-202ENST00000394342 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 CDC5LQ99459 802 aaKnown RBP10.83□□□□□ -0.68
APLF-202ENST00000394342 BCL2L13Q9BXK5 485 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 ZNF646O15015 1829 aaPredicted RBP10.83□□□□□ -0.68
APLF-202ENST00000394342 TRPM7Q96QT4 1865 aa10.83□□□□□ -0.68
APLF-202ENST00000394342 KIF3CO14782 793 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 CSF1RP07333 972 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 RARSP54136 660 aaKnown RBP10.82□□□□□ -0.68
APLF-202ENST00000394342 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
APLF-202ENST00000394342 GREM2Q9H772 168 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 NMRK2Q9NPI5 230 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
APLF-202ENST00000394342 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
APLF-202ENST00000394342 FZD9O00144 591 aa10.81□□□□□ -0.68
APLF-202ENST00000394342 PPIP5K2O43314 1243 aa10.81□□□□□ -0.68
APLF-202ENST00000394342 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
APLF-202ENST00000394342 UTYO14607 1347 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms