RNA–Protein interactions for RNA: ENST00000394125.8

RABEPK-204, Transcript of Rab9 effector protein with kelch motifs, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABEPK, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-204ENST00000394125 CSF1RP07333 972 aa24.73■■□□□ 1.55
RABEPK-204ENST00000394125 ANKRD44Q8N8A2 993 aa24.73■■□□□ 1.55
RABEPK-204ENST00000394125 HOXA10P31260 410 aaPredicted RBP24.72■■□□□ 1.55
RABEPK-204ENST00000394125 BICC1Q9H694 974 aaKnown RBP24.72■■□□□ 1.55
RABEPK-204ENST00000394125 LRRFIP2Q9Y608 721 aaKnown RBP24.72■■□□□ 1.55
RABEPK-204ENST00000394125 NPR1P16066 1061 aa24.71■■□□□ 1.55
RABEPK-204ENST00000394125 RABL6Q3YEC7 729 aaPredicted RBP24.71■■□□□ 1.55
RABEPK-204ENST00000394125 MASTLQ96GX5 879 aa24.71■■□□□ 1.55
RABEPK-204ENST00000394125 COL11A2P13942 1736 aaPredicted RBP24.71■■□□□ 1.55
RABEPK-204ENST00000394125 CCDC152Q4G0S7 254 aa24.7■■□□□ 1.55
RABEPK-204ENST00000394125 STYK1Q6J9G0 422 aa24.7■■□□□ 1.55
RABEPK-204ENST00000394125 LMBR1LQ6UX01 489 aa24.7■■□□□ 1.55
RABEPK-204ENST00000394125 RPGRQ92834 1020 aaKnown RBP24.7■■□□□ 1.54
RABEPK-204ENST00000394125 CCDC85AQ96PX6 553 aaPredicted RBP24.7■■□□□ 1.54
RABEPK-204ENST00000394125 CRBNQ96SW2 442 aa24.7■■□□□ 1.54
RABEPK-204ENST00000394125 ZBTB40Q9NUA8 1239 aa24.7■■□□□ 1.54
RABEPK-204ENST00000394125 HDAC5Q9UQL6 1122 aa24.7■■□□□ 1.54
RABEPK-204ENST00000394125 GNAI2P04899 355 aa24.69■■□□□ 1.54
RABEPK-204ENST00000394125 ZNF622Q969S3 477 aaKnown RBP eCLIP24.69■■□□□ 1.54
RABEPK-204ENST00000394125 GREM2Q9H772 168 aa24.69■■□□□ 1.54
RABEPK-204ENST00000394125 RTL9Q8NET4 1388 aa24.68■■□□□ 1.54
RABEPK-204ENST00000394125 RBM17Q96I25 401 aaKnown RBP24.68■■□□□ 1.54
RABEPK-204ENST00000394125 CRAMP1Q96RY5 1269 aa24.68■■□□□ 1.54
RABEPK-204ENST00000394125 SEC31BQ9NQW1 1179 aa24.68■■□□□ 1.54
RABEPK-204ENST00000394125 FAM161AQ3B820 660 aa24.67■■□□□ 1.54
RABEPK-204ENST00000394125 DDX46Q7L014 1031 aaKnown RBP24.67■■□□□ 1.54
RABEPK-204ENST00000394125 CHMP4BQ9H444 224 aaKnown RBP24.66■■□□□ 1.54
RABEPK-204ENST00000394125 C1orf115Q9H7X2 142 aa24.66■■□□□ 1.54
RABEPK-204ENST00000394125 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
RABEPK-204ENST00000394125 CNKSR1Q969H4 720 aa24.65■■□□□ 1.54
RABEPK-204ENST00000394125 ITGA6P23229 1130 aa24.64■■□□□ 1.54
RABEPK-204ENST00000394125 ALDH1B1P30837 517 aa24.64■■□□□ 1.54
RABEPK-204ENST00000394125 TTLL6Q8N841 843 aa24.64■■□□□ 1.54
RABEPK-204ENST00000394125 CELF1Q92879 486 aaKnown RBP24.64■■□□□ 1.54
RABEPK-204ENST00000394125 MTX1Q13505 466 aa24.64■■□□□ 1.53
RABEPK-204ENST00000394125 GRAPQ13588 217 aa24.64■■□□□ 1.53
RABEPK-204ENST00000394125 GRAPLQ8TC17 118 aaPredicted RBP24.64■■□□□ 1.53
RABEPK-204ENST00000394125 CHMP3Q9Y3E7 222 aa24.64■■□□□ 1.53
RABEPK-204ENST00000394125 COL4A1P02462 1669 aa24.63■■□□□ 1.53
RABEPK-204ENST00000394125 DLEC1Q9Y238 1755 aa24.63■■□□□ 1.53
RABEPK-204ENST00000394125 IRX6P78412 446 aaPredicted RBP24.63■■□□□ 1.53
RABEPK-204ENST00000394125 WWC3Q9ULE0 1092 aa24.63■■□□□ 1.53
RABEPK-204ENST00000394125 PRPF40BQ6NWY9 871 aaKnown RBP24.62■■□□□ 1.53
RABEPK-204ENST00000394125 EXOC6Q8TAG9 804 aa24.62■■□□□ 1.53
RABEPK-204ENST00000394125 MYH3P11055 1940 aa24.61■■□□□ 1.53
RABEPK-204ENST00000394125 IFIT5Q13325 482 aaKnown RBP24.61■■□□□ 1.53
RABEPK-204ENST00000394125 DALRD3Q5D0E6 543 aaKnown RBP24.61■■□□□ 1.53
RABEPK-204ENST00000394125 ANKRD18BA2A2Z9 1011 aa24.6■■□□□ 1.53
RABEPK-204ENST00000394125 BBOX1O75936 387 aa24.6■■□□□ 1.53
RABEPK-204ENST00000394125 RFX5P48382 616 aaPredicted RBP24.6■■□□□ 1.53
RABEPK-204ENST00000394125 RPS8P62241 208 aaKnown RBP24.6■■□□□ 1.53
RABEPK-204ENST00000394125 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
RABEPK-204ENST00000394125 CDC5LQ99459 802 aaKnown RBP24.6■■□□□ 1.53
RABEPK-204ENST00000394125 CEP85Q6P2H3 762 aa24.59■■□□□ 1.53
RABEPK-204ENST00000394125 SLC51AQ86UW1 340 aa24.59■■□□□ 1.53
RABEPK-204ENST00000394125 C7orf43Q8WVR3 580 aa24.59■■□□□ 1.53
RABEPK-204ENST00000394125 PNMA6EA0A0J9YXQ4 647 aa24.58■■□□□ 1.53
RABEPK-204ENST00000394125 ATP8B2P98198 1209 aa24.58■■□□□ 1.53
RABEPK-204ENST00000394125 BRCA1P38398 1863 aaKnown RBP24.58■■□□□ 1.53
RABEPK-204ENST00000394125 PPEF1O14829 653 aaPredicted RBP24.58■■□□□ 1.52
RABEPK-204ENST00000394125 SRGAP3O43295 1099 aa24.58■■□□□ 1.52
RABEPK-204ENST00000394125 ANKRD18AQ8IVF6 992 aa24.58■■□□□ 1.52
RABEPK-204ENST00000394125 ZNF594Q96JF6 807 aaPredicted RBP24.58■■□□□ 1.52
RABEPK-204ENST00000394125 BCS1LQ9Y276 419 aa24.58■■□□□ 1.52
RABEPK-204ENST00000394125 PTPN12Q05209 780 aaKnown RBP24.56■■□□□ 1.52
RABEPK-204ENST00000394125 POLA2Q14181 598 aa24.56■■□□□ 1.52
RABEPK-204ENST00000394125 KLHDC4Q8TBB5 520 aa24.56■■□□□ 1.52
RABEPK-204ENST00000394125 SSH3Q8TE77 659 aa24.56■■□□□ 1.52
RABEPK-204ENST00000394125 BSDC1Q9NW68 430 aaPredicted RBP24.56■■□□□ 1.52
RABEPK-204ENST00000394125 SLX4Q8IY92 1834 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 GOLGB1Q14789 3259 aaKnown RBP24.55■■□□□ 1.52
RABEPK-204ENST00000394125 C21orf2O43822 256 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 YBX3P16989 372 aaKnown RBP eCLIP24.55■■□□□ 1.529e-6■□□□□ 10.4
RABEPK-204ENST00000394125 IGHMBP2P38935 993 aaKnown RBP24.55■■□□□ 1.52
RABEPK-204ENST00000394125 OLFM4Q6UX06 510 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 TMC4Q7Z404 712 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 RPAP2Q8IXW5 612 aaPredicted RBP24.55■■□□□ 1.52
RABEPK-204ENST00000394125 ATP6V0A2Q9Y487 856 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 TAF1P21675 1872 aa24.55■■□□□ 1.52
RABEPK-204ENST00000394125 AAMPQ13685 434 aa24.54■■□□□ 1.52
RABEPK-204ENST00000394125 SP8Q8IXZ3 490 aa24.54■■□□□ 1.52
RABEPK-204ENST00000394125 ZNF219Q9P2Y4 722 aaPredicted RBP24.54■■□□□ 1.52
RABEPK-204ENST00000394125 TAF7LQ5H9L4 462 aa24.53■■□□□ 1.52
RABEPK-204ENST00000394125 PCDHB15Q9Y5E8 787 aa24.53■■□□□ 1.52
RABEPK-204ENST00000394125 PUS3Q9BZE2 481 aaKnown RBP24.52■■□□□ 1.52
RABEPK-204ENST00000394125 COPRSQ9NQ92 184 aa24.52■■□□□ 1.52
RABEPK-204ENST00000394125 PA2G4Q9UQ80 394 aaKnown RBP24.52■■□□□ 1.52
RABEPK-204ENST00000394125 LDHAL6AQ6ZMR3 332 aa24.51■■□□□ 1.51
RABEPK-204ENST00000394125 PELP1Q8IZL8 1130 aaKnown RBP24.51■■□□□ 1.51
RABEPK-204ENST00000394125 MPHOSPH8Q99549 860 aa24.51■■□□□ 1.51
RABEPK-204ENST00000394125 SNED1Q8TER0 1413 aa24.51■■□□□ 1.51
RABEPK-204ENST00000394125 MINPP1Q9UNW1 487 aa24.51■■□□□ 1.51
RABEPK-204ENST00000394125 LRRC24Q50LG9 513 aa24.5■■□□□ 1.51
RABEPK-204ENST00000394125 CC2D2BQ6DHV5 1058 aa24.5■■□□□ 1.51
RABEPK-204ENST00000394125 RIPOR2Q9Y4F9 1068 aa24.5■■□□□ 1.51
RABEPK-204ENST00000394125 SOGA3Q5TF21 947 aa24.49■■□□□ 1.51
RABEPK-204ENST00000394125 EYA2O00167 538 aa24.48■■□□□ 1.51
RABEPK-204ENST00000394125 GPR162Q16538 588 aa24.48■■□□□ 1.51
RABEPK-204ENST00000394125 CCDC93Q567U6 631 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms