RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HYPKQ9NX55 129 aa22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 GPRC5DQ9NZD1 345 aa22.78■■□□□ 1.24
SNRPA1-202ENST00000394082 TRIM28Q13263 835 aaKnown RBP22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 DEFB115Q30KQ5 88 aa22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 ISCA1Q9BUE6 129 aa22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 PRDM10Q9NQV6 1147 aa22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 ADARB2Q9NS39 739 aaKnown RBP22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 LAS1LQ9Y4W2 734 aaKnown RBP22.77■■□□□ 1.24
SNRPA1-202ENST00000394082 CXCL9Q07325 125 aa22.76■■□□□ 1.23
SNRPA1-202ENST00000394082 ZNF853P0CG23 659 aa22.75■■□□□ 1.23
SNRPA1-202ENST00000394082 SF3B3Q15393 1217 aaKnown RBP22.75■■□□□ 1.23
SNRPA1-202ENST00000394082 PRKRIP1Q9H875 184 aaPredicted RBP22.75■■□□□ 1.23
SNRPA1-202ENST00000394082 WBP1LQ9NX94 342 aa22.75■■□□□ 1.23
SNRPA1-202ENST00000394082 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
SNRPA1-202ENST00000394082 FOXN1O15353 648 aa22.74■■□□□ 1.23
SNRPA1-202ENST00000394082 AIDAQ96BJ3 306 aa22.74■■□□□ 1.23
SNRPA1-202ENST00000394082 CTCFP49711 727 aaPredicted RBP22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 TNIP1Q15025 636 aa22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 DUSP27Q5VZP5 1158 aa22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 CIAPIN1Q6FI81 312 aa22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 PGAP2Q9UHJ9 254 aa22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 DDX60Q8IY21 1712 aaKnown RBP22.73■■□□□ 1.23
SNRPA1-202ENST00000394082 ZC3H15Q8WU90 426 aaKnown RBP22.72■■□□□ 1.23
SNRPA1-202ENST00000394082 MBIPQ9NS73 344 aa22.72■■□□□ 1.23
SNRPA1-202ENST00000394082 MAP2K1Q02750 393 aaPredicted RBP22.71■■□□□ 1.23
SNRPA1-202ENST00000394082 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
SNRPA1-202ENST00000394082 ABT1Q9ULW3 272 aaKnown RBP22.71■■□□□ 1.23
SNRPA1-202ENST00000394082 WDR33Q9C0J8 1336 aaKnown RBP22.71■■□□□ 1.23
SNRPA1-202ENST00000394082 DUOX1Q9NRD9 1551 aa22.71■■□□□ 1.23
SNRPA1-202ENST00000394082 FAM89AQ96GI7 184 aa22.7■■□□□ 1.22
SNRPA1-202ENST00000394082 CHMP4AQ9BY43 222 aa22.7■■□□□ 1.22
SNRPA1-202ENST00000394082 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
SNRPA1-202ENST00000394082 HSP90B1P14625 803 aaKnown RBP22.69■■□□□ 1.22
SNRPA1-202ENST00000394082 ECE1P42892 770 aa22.69■■□□□ 1.22
SNRPA1-202ENST00000394082 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
SNRPA1-202ENST00000394082 GNAI1P63096 354 aa22.69■■□□□ 1.22
SNRPA1-202ENST00000394082 CST9Q5W186 159 aa22.69■■□□□ 1.22
SNRPA1-202ENST00000394082 THSD7BQ9C0I4 1608 aa22.68■■□□□ 1.22
SNRPA1-202ENST00000394082 TAF1P21675 1872 aa22.67■■□□□ 1.22
SNRPA1-202ENST00000394082 ATP5J2-PTCD1G3V325 749 aa22.67■■□□□ 1.22
SNRPA1-202ENST00000394082 DPF2Q92785 391 aa22.67■■□□□ 1.22
SNRPA1-202ENST00000394082 TLL2Q9Y6L7 1015 aa22.67■■□□□ 1.22
SNRPA1-202ENST00000394082 YDJCA8MPS7 323 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 APAF1O14727 1248 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 GOLGA2Q08379 1002 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 WASHC4Q2M389 1173 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 ZBTB38Q8NAP3 1195 aaPredicted RBP22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 CELF1Q92879 486 aaKnown RBP22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 HHIPL1Q96JK4 782 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
SNRPA1-202ENST00000394082 TRAF5O00463 557 aa22.65■■□□□ 1.22
SNRPA1-202ENST00000394082 IRS4O14654 1257 aaPredicted RBP22.65■■□□□ 1.22
SNRPA1-202ENST00000394082 RAD17O75943 681 aa22.65■■□□□ 1.22
SNRPA1-202ENST00000394082 RIC3Q7Z5B4 369 aa22.65■■□□□ 1.22
SNRPA1-202ENST00000394082 NSFL1CQ9UNZ2 370 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-202ENST00000394082 CAPN15O75808 1086 aa22.64■■□□□ 1.21
SNRPA1-202ENST00000394082 RPS8P62241 208 aaKnown RBP22.64■■□□□ 1.21
SNRPA1-202ENST00000394082 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.21
SNRPA1-202ENST00000394082 CAPNS2Q96L46 248 aa22.64■■□□□ 1.21
SNRPA1-202ENST00000394082 CNOT7Q9UIV1 285 aaKnown RBP22.64■■□□□ 1.21
SNRPA1-202ENST00000394082 H7C1D1 291 aa22.63■■□□□ 1.21
SNRPA1-202ENST00000394082 FMR1Q06787 632 aaKnown RBP eCLIP22.63■■□□□ 1.21
SNRPA1-202ENST00000394082 EYA3Q99504 573 aa22.63■■□□□ 1.21
SNRPA1-202ENST00000394082 PODXL2Q9NZ53 605 aa22.63■■□□□ 1.21
SNRPA1-202ENST00000394082 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 MAP2K2P36507 400 aa22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 HIRAP54198 1017 aaPredicted RBP22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 CDC37L1Q7L3B6 337 aa22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 SAPCD2Q86UD0 394 aa22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 POLLQ9UGP5 575 aa22.62■■□□□ 1.21
SNRPA1-202ENST00000394082 HSPA8P11142 646 aaKnown RBP22.61■■□□□ 1.21
SNRPA1-202ENST00000394082 LBX1P52954 281 aa22.61■■□□□ 1.21
SNRPA1-202ENST00000394082 GPR101Q96P66 508 aaPredicted RBP22.61■■□□□ 1.21
SNRPA1-202ENST00000394082 PHAXQ9H814 394 aaKnown RBP22.61■■□□□ 1.21
SNRPA1-202ENST00000394082 PCCAP05165 728 aaPredicted RBP22.6■■□□□ 1.21
SNRPA1-202ENST00000394082 GPSM2P81274 684 aa22.6■■□□□ 1.21
SNRPA1-202ENST00000394082 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
SNRPA1-202ENST00000394082 C6orf229H3BNL8 230 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 PSMD14O00487 310 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 CELF2O95319 508 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 DDX58O95786 925 aaKnown RBP22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 CYP4F22Q6NT55 531 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 MICALL2Q8IY33 904 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 TBC1D16Q8TBP0 767 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 TRPM4Q8TD43 1214 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 ZNF428Q96B54 188 aa22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 GLIS2Q9BZE0 524 aaPredicted RBP22.59■■□□□ 1.21
SNRPA1-202ENST00000394082 PDE8AO60658 829 aa22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 RTL5Q5HYW3 569 aaPredicted RBP22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 BEGAINQ9BUH8 593 aa22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 METTL22Q9BUU2 404 aaPredicted RBP22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 CWC25Q9NXE8 425 aaPredicted RBP22.58■■□□□ 1.21
SNRPA1-202ENST00000394082 COL4A1P02462 1669 aa22.58■■□□□ 1.2
SNRPA1-202ENST00000394082 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
SNRPA1-202ENST00000394082 MYD88Q99836 296 aa22.57■■□□□ 1.2
SNRPA1-202ENST00000394082 DBNDD1Q9H9R9 158 aa22.57■■□□□ 1.2
SNRPA1-202ENST00000394082 ZNF609O15014 1411 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms