RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 Q6ZUG5 572 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 RRP12Q5JTH9 1297 aaKnown RBP22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 TNMDQ9H2S6 317 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 PAG1Q9NWQ8 432 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 PCDH11XQ9BZA7 1347 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 PCDH11YQ9BZA8 1340 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 TBC1D2BQ9UPU7 963 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 ZDHHC9Q9Y397 364 aa22.25■■□□□ 1.15
SMARCC2-203ENST00000394023 CEMIPQ8WUJ3 1361 aa22.24■■□□□ 1.15
SMARCC2-203ENST00000394023 GOLGA6L19H0YKK7 550 aa22.24■■□□□ 1.15
SMARCC2-203ENST00000394023 DBNLQ9UJU6 430 aaKnown RBP22.24■■□□□ 1.15
SMARCC2-203ENST00000394023 CCDC73Q6ZRK6 1079 aa22.24■■□□□ 1.15
SMARCC2-203ENST00000394023 BTG4Q9NY30 223 aa22.24■■□□□ 1.15
SMARCC2-203ENST00000394023 IL15P40933 162 aaPredicted RBP22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 ME3Q16798 604 aa22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 UBE2HP62256 183 aa22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 MPHOSPH8Q99549 860 aa22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 LETM1O95202 739 aaPredicted RBP22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 DNAJC10Q8IXB1 793 aa22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 NUP62CLQ9H1M0 184 aa22.23■■□□□ 1.15
SMARCC2-203ENST00000394023 EXOC5O00471 708 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 LARGE1O95461 756 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 CCDC192P0DO97 292 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 HMG20BQ9P0W2 317 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 DDIT3P35638 169 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 ME1P48163 572 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 VPS37DQ86XT2 251 aa22.22■■□□□ 1.15
SMARCC2-203ENST00000394023 GOLGA6L6A8MZA4 724 aa22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 CPLX2Q6PUV4 134 aaKnown RBP22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 HELBQ8NG08 1087 aaPredicted RBP22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 SDF4Q9BRK5 362 aa22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 A0A1B0GUL7 405 aa22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 CUL4AQ13619 759 aa22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 RIMS1Q86UR5 1692 aaKnown RBP22.21■■□□□ 1.15
SMARCC2-203ENST00000394023 CHAF1AQ13111 956 aaPredicted RBP22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 LRRC24Q50LG9 513 aa22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 ACSBG1Q96GR2 724 aa22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.146e-7■■□□□ 14
SMARCC2-203ENST00000394023 SYNE3Q6ZMZ3 975 aa22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 IMMTQ16891 758 aaKnown RBP22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 TPCN1Q9ULQ1 816 aa22.2■■□□□ 1.14
SMARCC2-203ENST00000394023 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
SMARCC2-203ENST00000394023 TRIM5Q9C035 493 aa22.19■■□□□ 1.14
SMARCC2-203ENST00000394023 C3P01024 1663 aa22.19■■□□□ 1.14
SMARCC2-203ENST00000394023 EYA2O00167 538 aa22.19■■□□□ 1.14
SMARCC2-203ENST00000394023 ZNF445P59923 1031 aa22.19■■□□□ 1.14
SMARCC2-203ENST00000394023 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 PIP4K2BP78356 416 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 PTPN12Q05209 780 aaKnown RBP22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 SLFNL1Q499Z3 407 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.146e-7■■■□□ 17.6
SMARCC2-203ENST00000394023 RPS6KB1P23443 525 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 APOBRQ0VD83 1088 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 MTX1Q13505 466 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 ZNF830Q96NB3 372 aaPredicted RBP22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 SLIT1O75093 1534 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 ATP2B1P20020 1258 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 CTNNA3Q9UI47 895 aa22.18■■□□□ 1.14
SMARCC2-203ENST00000394023 CLCN1P35523 988 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 GLIPR1L2Q4G1C9 344 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 PUS3Q9BZE2 481 aaKnown RBP22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 FAM13BQ9NYF5 915 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 ANKRD18BA2A2Z9 1011 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 MAP3K11Q16584 847 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 ATP5JP18859 108 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 BCL11BQ9C0K0 894 aaPredicted RBP22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 COPRSQ9NQ92 184 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 MON2Q7Z3U7 1717 aa22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 SCAND2PQ9GZW5 306 aaPredicted RBP22.17■■□□□ 1.14
SMARCC2-203ENST00000394023 JAK2O60674 1132 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 CHGBP05060 677 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 KINO60870 393 aaKnown RBP22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 ATP2B3Q16720 1220 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 ZSWIM6Q9HCJ5 1215 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 ASAP1Q9ULH1 1129 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 C1orf167Q5SNV9 1468 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 TRIM29Q14134 588 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 STK38Q15208 465 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 MAP4K1Q92918 833 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 CHMP4CQ96CF2 233 aa22.16■■□□□ 1.14
SMARCC2-203ENST00000394023 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
SMARCC2-203ENST00000394023 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
SMARCC2-203ENST00000394023 SALL3Q9BXA9 1300 aa22.15■■□□□ 1.14
SMARCC2-203ENST00000394023 HSP90AA2PQ14568 343 aaPredicted RBP22.15■■□□□ 1.14
SMARCC2-203ENST00000394023 PDIA6Q15084 440 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 BRINP3Q76B58 766 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 KBTBD3Q8NAB2 608 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 ABCF2Q9UG63 623 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 CFAP45Q9UL16 551 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 ZNF213O14771 459 aa22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 NCOA5Q9HCD5 579 aaKnown RBP22.14■■□□□ 1.14
SMARCC2-203ENST00000394023 AIDAQ96BJ3 306 aa22.14■■□□□ 1.13
SMARCC2-203ENST00000394023 CCDC144CPQ8IYA2 1237 aa22.14■■□□□ 1.13
SMARCC2-203ENST00000394023 CCDC82Q8N4S0 544 aa22.14■■□□□ 1.13
SMARCC2-203ENST00000394023 TEX13AQ9BXU3 409 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms