RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 LUC7LQ9NQ29 371 aaKnown RBP9.96□□□□□ -0.82
GABRA1-202ENST00000393943 DNAI1Q9UI46 699 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 UBASH3AP57075 661 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 ABTB2Q8N961 1025 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 KCNH5Q8NCM2 988 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 BOLA2Q9H3K6 86 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 STIM1Q13586 685 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 EHBP1Q8NDI1 1231 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 GNG11P61952 73 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 AXDND1Q5T1B0 1012 aaPredicted RBP9.95□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 CTAGE1Q96RT6 745 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 MAGEC2Q9UBF1 373 aaPredicted RBP9.95□□□□□ -0.82
GABRA1-202ENST00000393943 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
GABRA1-202ENST00000393943 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 FCHSD1Q86WN1 690 aa9.95□□□□□ -0.82
GABRA1-202ENST00000393943 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
GABRA1-202ENST00000393943 ADGRB2O60241 1585 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 MICALCLQ6ZW33 695 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 MYO6Q9UM54 1294 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 GLI2P10070 1586 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 LMAN1P49257 510 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 NRXN1Q9ULB1 1477 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
GABRA1-202ENST00000393943 C17orf53Q8N3J3 647 aaPredicted RBP9.94□□□□□ -0.82
GABRA1-202ENST00000393943 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
GABRA1-202ENST00000393943 PI4KAP2A4QPH2 592 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 SARM1Q6SZW1 724 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 PI4KAP1Q8N8J0 262 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 CNNM3Q8NE01 707 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 SIL1Q9H173 461 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 PYCARDQ9ULZ3 195 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 AKAP2Q9Y2D5 859 aa9.94□□□□□ -0.82
GABRA1-202ENST00000393943 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 MYO3AQ8NEV4 1616 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 A6NNZ2 444 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC175P0C221 793 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 SYKP43405 635 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 PSME1Q06323 249 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 NMIQ13287 307 aaPredicted RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 TTC39AQ5SRH9 613 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 SYT10Q6XYQ8 523 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 ZDHHC9Q9Y397 364 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 SBNO1A3KN83 1393 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 CKAP4Q07065 602 aaKnown RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 PDE4CQ08493 712 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 ELF2Q15723 593 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 DDX41Q9UJV9 622 aaKnown RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 MRVI1Q9Y6F6 885 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 DHX32Q7L7V1 743 aaKnown RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 HDXQ7Z353 690 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.82
GABRA1-202ENST00000393943 ACEP12821 1306 aa9.93□□□□□ -0.82
GABRA1-202ENST00000393943 SLC27A2O14975 620 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 SPTLC2O15270 562 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 ARHGAP6O43182 974 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 SPAG1Q07617 926 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 LINS1Q8NG48 757 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC12Q8WUD4 166 aaPredicted RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 EFCAB8A8MWE9 144 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 MYL5Q02045 173 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 MTHFSDQ2M296 383 aaKnown RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 Q6ZUG5 572 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 LSG1Q9H089 658 aaKnown RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 DNAJC5BQ9UF47 199 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 GOLGA6L10A6NI86 522 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 BMP15O95972 392 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 SMARCC1Q92922 1105 aaPredicted RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC8Q9H0W5 538 aaPredicted RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 MKRN1Q9UHC7 482 aaKnown RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
GABRA1-202ENST00000393943 ZCCHC11Q5TAX3 1644 aaKnown RBP9.92□□□□□ -0.82
GABRA1-202ENST00000393943 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 CTAGE8P0CG41 777 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 BRD3Q15059 726 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 IFNKQ9P0W0 207 aa9.91□□□□□ -0.82
GABRA1-202ENST00000393943 ORC3Q9UBD5 711 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms