RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 VPS33BQ9H267 617 aa24.26■■□□□ 1.47
SNCB-202ENST00000393693 GPRC5DQ9NZD1 345 aa24.26■■□□□ 1.47
SNCB-202ENST00000393693 CST9Q5W186 159 aa24.25■■□□□ 1.47
SNCB-202ENST00000393693 SUPT20HQ8NEM7 779 aa24.25■■□□□ 1.47
SNCB-202ENST00000393693 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
SNCB-202ENST00000393693 GMPSP49915 693 aaPredicted RBP24.24■■□□□ 1.47
SNCB-202ENST00000393693 PAXIP1Q6ZW49 1069 aaPredicted RBP24.24■■□□□ 1.47
SNCB-202ENST00000393693 DDX46Q7L014 1031 aaKnown RBP24.24■■□□□ 1.47
SNCB-202ENST00000393693 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
SNCB-202ENST00000393693 CHPF2Q9P2E5 772 aa24.24■■□□□ 1.47
SNCB-202ENST00000393693 SH3TC1Q8TE82 1336 aa24.24■■□□□ 1.47
SNCB-202ENST00000393693 HSPA8P11142 646 aaKnown RBP24.23■■□□□ 1.47
SNCB-202ENST00000393693 GRM1Q13255 1194 aa24.23■■□□□ 1.47
SNCB-202ENST00000393693 GRAPQ13588 217 aa24.23■■□□□ 1.47
SNCB-202ENST00000393693 CYP4F22Q6NT55 531 aa24.23■■□□□ 1.47
SNCB-202ENST00000393693 GRAPLQ8TC17 118 aaPredicted RBP24.23■■□□□ 1.47
SNCB-202ENST00000393693 MRS2Q9HD23 443 aa24.23■■□□□ 1.47
SNCB-202ENST00000393693 LAMB2P55268 1798 aa24.23■■□□□ 1.47
SNCB-202ENST00000393693 RAD17O75943 681 aa24.22■■□□□ 1.47
SNCB-202ENST00000393693 KIAA2012Q0VF49 1180 aa24.22■■□□□ 1.47
SNCB-202ENST00000393693 CIAPIN1Q6FI81 312 aa24.22■■□□□ 1.47
SNCB-202ENST00000393693 CAPNS2Q96L46 248 aa24.22■■□□□ 1.47
SNCB-202ENST00000393693 ANKRD36CQ5JPF3 1778 aa24.21■■□□□ 1.47
SNCB-202ENST00000393693 MAP2K1Q02750 393 aaPredicted RBP24.21■■□□□ 1.47
SNCB-202ENST00000393693 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
SNCB-202ENST00000393693 HDGFL1Q5TGJ6 251 aa24.2■■□□□ 1.46
SNCB-202ENST00000393693 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
SNCB-202ENST00000393693 YDJCA8MPS7 323 aa24.19■■□□□ 1.46
SNCB-202ENST00000393693 ATP5J2-PTCD1G3V325 749 aa24.19■■□□□ 1.46
SNCB-202ENST00000393693 HIRAP54198 1017 aaPredicted RBP24.19■■□□□ 1.46
SNCB-202ENST00000393693 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
SNCB-202ENST00000393693 GLIS2Q9BZE0 524 aaPredicted RBP24.19■■□□□ 1.46
SNCB-202ENST00000393693 TLL2Q9Y6L7 1015 aa24.19■■□□□ 1.46
SNCB-202ENST00000393693 TAF1P21675 1872 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 ANKRD13DQ6ZTN6 518 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 PLBD2Q8NHP8 589 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 FAM89AQ96GI7 184 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 GPR101Q96P66 508 aaPredicted RBP24.18■■□□□ 1.46
SNCB-202ENST00000393693 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
SNCB-202ENST00000393693 ECE1P42892 770 aa24.17■■□□□ 1.46
SNCB-202ENST00000393693 CELF1Q92879 486 aaKnown RBP24.17■■□□□ 1.46
SNCB-202ENST00000393693 ISCA1Q9BUE6 129 aa24.17■■□□□ 1.46
SNCB-202ENST00000393693 AOC2O75106 756 aa24.16■■□□□ 1.46
SNCB-202ENST00000393693 CELF2O95319 508 aaKnown RBP24.16■■□□□ 1.46
SNCB-202ENST00000393693 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
SNCB-202ENST00000393693 TNIP1Q15025 636 aa24.16■■□□□ 1.46
SNCB-202ENST00000393693 WDR43Q15061 677 aaKnown RBP eCLIP24.16■■□□□ 1.46
SNCB-202ENST00000393693 RTL5Q5HYW3 569 aaPredicted RBP24.16■■□□□ 1.46
SNCB-202ENST00000393693 TRPM4Q8TD43 1214 aa24.16■■□□□ 1.46
SNCB-202ENST00000393693 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
SNCB-202ENST00000393693 DUOX1Q9NRD9 1551 aa24.16■■□□□ 1.46
SNCB-202ENST00000393693 DBF4Q9UBU7 674 aaPredicted RBP24.15■■□□□ 1.46
SNCB-202ENST00000393693 CNOT7Q9UIV1 285 aaKnown RBP24.15■■□□□ 1.46
SNCB-202ENST00000393693 NSFL1CQ9UNZ2 370 aaKnown RBP24.14■■□□□ 1.45
SNCB-202ENST00000393693 ZBTB12Q9Y330 459 aaPredicted RBP24.14■■□□□ 1.45
SNCB-202ENST00000393693 TRPM7Q96QT4 1865 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 RIMBP2O15034 1052 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 HOXB7P09629 217 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 SF3B3Q15393 1217 aaKnown RBP24.13■■□□□ 1.45
SNCB-202ENST00000393693 DUSP27Q5VZP5 1158 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 TMC4Q7Z404 712 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 SAPCD2Q86UD0 394 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 ZNF408Q9H9D4 720 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 COL4A1P02462 1669 aa24.13■■□□□ 1.45
SNCB-202ENST00000393693 DDX60Q8IY21 1712 aaKnown RBP24.13■■□□□ 1.45
SNCB-202ENST00000393693 CDHR2Q9BYE9 1310 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 WASHC4Q2M389 1173 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 DLK2Q6UY11 383 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 DBNDD1Q9H9R9 158 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 TSKSQ9UJT2 592 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 THSD7BQ9C0I4 1608 aa24.12■■□□□ 1.45
SNCB-202ENST00000393693 GPSM2P81274 684 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 MICALL2Q8IY33 904 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 ZC3H15Q8WU90 426 aaKnown RBP24.11■■□□□ 1.45
SNCB-202ENST00000393693 BEGAINQ9BUH8 593 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 MBIPQ9NS73 344 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 HYPKQ9NX55 129 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 POLLQ9UGP5 575 aa24.11■■□□□ 1.45
SNCB-202ENST00000393693 C6orf229H3BNL8 230 aa24.1■■□□□ 1.45
SNCB-202ENST00000393693 H7C1D1 291 aa24.1■■□□□ 1.45
SNCB-202ENST00000393693 PSMD14O00487 310 aa24.1■■□□□ 1.45
SNCB-202ENST00000393693 ABHD8Q96I13 439 aa24.1■■□□□ 1.45
SNCB-202ENST00000393693 KCNQ5Q9NR82 932 aa24.1■■□□□ 1.45
SNCB-202ENST00000393693 IRS4O14654 1257 aaPredicted RBP24.09■■□□□ 1.45
SNCB-202ENST00000393693 CDC37L1Q7L3B6 337 aa24.09■■□□□ 1.45
SNCB-202ENST00000393693 SAMD7Q7Z3H4 446 aa24.09■■□□□ 1.45
SNCB-202ENST00000393693 USP48Q86UV5 1035 aa24.09■■□□□ 1.45
SNCB-202ENST00000393693 LRRC37AA6NMS7 1700 aa24.09■■□□□ 1.45
SNCB-202ENST00000393693 MAP2K2P36507 400 aa24.08■■□□□ 1.45
SNCB-202ENST00000393693 DOK7Q18PE1 504 aa24.08■■□□□ 1.45
SNCB-202ENST00000393693 PHAXQ9H814 394 aaKnown RBP24.08■■□□□ 1.45
SNCB-202ENST00000393693 ELL2O00472 640 aaPredicted RBP24.07■■□□□ 1.44
SNCB-202ENST00000393693 EGFRP00533 1210 aa24.07■■□□□ 1.44
SNCB-202ENST00000393693 TRIM28Q13263 835 aaKnown RBP24.07■■□□□ 1.44
SNCB-202ENST00000393693 ZNF853P0CG23 659 aa24.06■■□□□ 1.44
SNCB-202ENST00000393693 TBC1D10BQ4KMP7 808 aaPredicted RBP24.06■■□□□ 1.44
SNCB-202ENST00000393693 RIC3Q7Z5B4 369 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms