RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
MBD4-202ENST00000393278 C22orf23Q9BZE7 217 aa21.41■■□□□ 1.02
MBD4-202ENST00000393278 CCDC8Q9H0W5 538 aaPredicted RBP21.41■■□□□ 1.02
MBD4-202ENST00000393278 FPGT-TNNI3KV9GXZ4 949 aa21.41■■□□□ 1.02
MBD4-202ENST00000393278 TRIM6-TRIM34B2RNG4 842 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 NTSR2O95665 410 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 IFIT5Q13325 482 aaKnown RBP21.4■■□□□ 1.02
MBD4-202ENST00000393278 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 RILPL2Q969X0 211 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 CCDC85AQ96PX6 553 aaPredicted RBP21.4■■□□□ 1.02
MBD4-202ENST00000393278 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
MBD4-202ENST00000393278 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
MBD4-202ENST00000393278 LRRC24Q50LG9 513 aa21.39■■□□□ 1.01
MBD4-202ENST00000393278 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
MBD4-202ENST00000393278 GREM2Q9H772 168 aa21.39■■□□□ 1.01
MBD4-202ENST00000393278 GPR108Q9NPR9 543 aa21.39■■□□□ 1.01
MBD4-202ENST00000393278 EP400Q96L91 3159 aa21.39■■□□□ 1.01
MBD4-202ENST00000393278 FAM177BA6PVY3 158 aa21.38■■□□□ 1.01
MBD4-202ENST00000393278 USPL1Q5W0Q7 1092 aa21.38■■□□□ 1.01
MBD4-202ENST00000393278 HSP90B1P14625 803 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 ITGA6P23229 1130 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 TAF7LQ5H9L4 462 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 PUS3Q9BZE2 481 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 LAMB2P55268 1798 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 ANKRD18BA2A2Z9 1011 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 MSH5O43196 834 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 ZPR1O75312 459 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 RBM25P49756 843 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 CNTROBQ8N137 903 aa21.37■■□□□ 1.01
MBD4-202ENST00000393278 SRP68Q9UHB9 627 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 DBNLQ9UJU6 430 aaKnown RBP21.37■■□□□ 1.01
MBD4-202ENST00000393278 DDX60Q8IY21 1712 aaKnown RBP21.36■■□□□ 1.01
MBD4-202ENST00000393278 HCLS1P14317 486 aaPredicted RBP21.36■■□□□ 1.01
MBD4-202ENST00000393278 TBC1D9BQ66K14 1250 aa21.36■■□□□ 1.01
MBD4-202ENST00000393278 RGS17Q9UGC6 210 aaPredicted RBP21.36■■□□□ 1.01
MBD4-202ENST00000393278 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
MBD4-202ENST00000393278 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
MBD4-202ENST00000393278 CHMLP26374 656 aa21.35■■□□□ 1.01
MBD4-202ENST00000393278 ZNF609O15014 1411 aa21.34■■□□□ 1.01
MBD4-202ENST00000393278 ADRA2BP18089 450 aa21.34■■□□□ 1.01
MBD4-202ENST00000393278 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
MBD4-202ENST00000393278 AK9Q5TCS8 1911 aa21.34■■□□□ 1.01
MBD4-202ENST00000393278 CEP126Q9P2H0 1117 aa21.34■■□□□ 1.01
MBD4-202ENST00000393278 COL24A1Q17RW2 1714 aa21.33■■□□□ 1.01
MBD4-202ENST00000393278 LRP5O75197 1615 aa21.33■■□□□ 1.01
MBD4-202ENST00000393278 RFC4P35249 363 aa21.33■■□□□ 1
MBD4-202ENST00000393278 DBNDD2Q9BQY9 259 aa21.33■■□□□ 1
MBD4-202ENST00000393278 UBR3Q6ZT12 1888 aa21.33■■□□□ 1
MBD4-202ENST00000393278 RTL9Q8NET4 1388 aa21.32■■□□□ 1
MBD4-202ENST00000393278 PHF14O94880 888 aa21.32■■□□□ 1
MBD4-202ENST00000393278 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
MBD4-202ENST00000393278 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
MBD4-202ENST00000393278 ESYT1Q9BSJ8 1104 aa21.32■■□□□ 1
MBD4-202ENST00000393278 RIPOR2Q9Y4F9 1068 aa21.32■■□□□ 1
MBD4-202ENST00000393278 RIC1Q4ADV7 1423 aa21.32■■□□□ 1
MBD4-202ENST00000393278 REC8O95072 547 aa21.31■■□□□ 1
MBD4-202ENST00000393278 ATP5JP18859 108 aa21.31■■□□□ 1
MBD4-202ENST00000393278 TXNRD1Q16881 649 aa21.31■■□□□ 1
MBD4-202ENST00000393278 LDHAL6AQ6ZMR3 332 aa21.31■■□□□ 1
MBD4-202ENST00000393278 EVI5LQ96CN4 794 aa21.31■■□□□ 1
MBD4-202ENST00000393278 SETDB2Q96T68 719 aa21.31■■□□□ 1
MBD4-202ENST00000393278 PLSCR1O15162 318 aa21.31■■□□□ 1
MBD4-202ENST00000393278 ERFEQ4G0M1 354 aa21.31■■□□□ 1
MBD4-202ENST00000393278 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
MBD4-202ENST00000393278 POTEAQ6S8J7 498 aa21.31■■□□□ 1
MBD4-202ENST00000393278 PROM2Q8N271 834 aa21.31■■□□□ 1
MBD4-202ENST00000393278 NYXQ9GZU5 481 aa21.31■■□□□ 1
MBD4-202ENST00000393278 USP26Q9BXU7 913 aa21.3■■□□□ 1
MBD4-202ENST00000393278 BOLA2Q9H3K6 86 aa21.3■■□□□ 1
MBD4-202ENST00000393278 AKAP2Q9Y2D5 859 aa21.3■■□□□ 1
MBD4-202ENST00000393278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.29■■□□□ 1
MBD4-202ENST00000393278 A0A1B0GUL7 405 aa21.29■■□□□ 1
MBD4-202ENST00000393278 SSFA2P28290 1259 aa21.29■■□□□ 1
MBD4-202ENST00000393278 TIMM10P62072 90 aa21.29■■□□□ 1
MBD4-202ENST00000393278 NEUROD6Q96NK8 337 aa21.29■■□□□ 1
MBD4-202ENST00000393278 CNNM1Q9NRU3 951 aa21.29■■□□□ 1
MBD4-202ENST00000393278 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
MBD4-202ENST00000393278 METTL24Q5JXM2 366 aa21.28■■□□□ 1
MBD4-202ENST00000393278 APBA3O96018 575 aa21.27■■□□□ 1
MBD4-202ENST00000393278 SF3B3Q15393 1217 aaKnown RBP21.27■■□□□ 1
MBD4-202ENST00000393278 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
MBD4-202ENST00000393278 ABCC12Q96J65 1359 aa21.27■■□□□ 1
MBD4-202ENST00000393278 GTF2E1P29083 439 aaPredicted RBP21.26■□□□□ 0.99
MBD4-202ENST00000393278 VGLL2Q8N8G2 317 aa21.26■□□□□ 0.99
MBD4-202ENST00000393278 SEC31BQ9NQW1 1179 aa21.26■□□□□ 0.99
MBD4-202ENST00000393278 KIF2CQ99661 725 aa21.25■□□□□ 0.99
MBD4-202ENST00000393278 HAUS7Q99871 368 aa21.25■□□□□ 0.99
MBD4-202ENST00000393278 MROH5Q6ZUA9 1318 aa21.25■□□□□ 0.99
MBD4-202ENST00000393278 TPTE2Q6XPS3 522 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 DIAPH3Q9NSV4 1193 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 TNS1Q9HBL0 1735 aaKnown RBP21.24■□□□□ 0.99
MBD4-202ENST00000393278 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 HIP1O00291 1037 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 SGSM2O43147 1006 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 ATP2B3Q16720 1220 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 MPHOSPH8Q99549 860 aa21.24■□□□□ 0.99
MBD4-202ENST00000393278 IL25Q9H293 177 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms