RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 UBE2HP62256 183 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 TBCAO75347 108 aaKnown RBP15.32■□□□□ 0.04
GSE1-202ENST00000393243 DNAJC25Q9H1X3 360 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 PHACTR2O75167 634 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 PI4KAP2A4QPH2 592 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 EEF2P13639 858 aaKnown RBP15.32■□□□□ 0.04
GSE1-202ENST00000393243 FAM114A1Q8IWE2 563 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 PI4KAP1Q8N8J0 262 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 FAM160A1Q05DH4 1040 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
GSE1-202ENST00000393243 FAM170AA1A519 330 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 C6orf163Q5TEZ5 329 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 VTI1AQ96AJ9 217 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 CALM1P0DP23 149 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 CALM2P0DP24 149 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 CALM3P0DP25 149 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 STX17P56962 302 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 PDE4BQ07343 736 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 BMS1Q14692 1282 aaKnown RBP15.31■□□□□ 0.04
GSE1-202ENST00000393243 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 KIF5BP33176 963 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
GSE1-202ENST00000393243 TMX3Q96JJ7 454 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 SKILP12757 684 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 CCDC50Q8IVM0 306 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
GSE1-202ENST00000393243 DHX58Q96C10 678 aa15.31■□□□□ 0.04
GSE1-202ENST00000393243 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
GSE1-202ENST00000393243 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
GSE1-202ENST00000393243 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
GSE1-202ENST00000393243 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 NAIPQ13075 1403 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 KIF4AO95239 1232 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 SSX2IPQ9Y2D8 614 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 WTAPQ15007 396 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 SPAG5Q96R06 1193 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 IQCGQ9H095 443 aaKnown RBP15.3■□□□□ 0.04
GSE1-202ENST00000393243 KCNH5Q8NCM2 988 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 PDIA4P13667 645 aaKnown RBP15.3■□□□□ 0.04
GSE1-202ENST00000393243 RXRAP19793 462 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 Q6ZUG5 572 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 MICALL1Q8N3F8 863 aa15.3■□□□□ 0.04
GSE1-202ENST00000393243 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
GSE1-202ENST00000393243 ZEB2O60315 1214 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 ACSBG1Q96GR2 724 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 CKAP4Q07065 602 aaKnown RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 HSPA4P34932 840 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 NEMFO60524 1076 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
GSE1-202ENST00000393243 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 CEP57Q86XR8 500 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 RPGRIP1LQ68CZ1 1315 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
GSE1-202ENST00000393243 TMCO4Q5TGY1 634 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 CYP7A1P22680 504 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 SP4Q02446 784 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 CFAP58Q5T655 872 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 SYT1P21579 422 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 ZBTB16Q05516 673 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 LRSAM1Q6UWE0 723 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 VPS18Q9P253 973 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
GSE1-202ENST00000393243 SDSP20132 328 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 ASIC1P78348 528 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 NOLC1Q14978 699 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■□□□ 12.3
GSE1-202ENST00000393243 STXBP4Q6ZWJ1 553 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 SPATA24Q86W54 205 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.04
GSE1-202ENST00000393243 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
GSE1-202ENST00000393243 TLDC2A0PJX2 215 aa15.27■□□□□ 0.03
GSE1-202ENST00000393243 CTAGE15A4D2H0 777 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms