RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
SYT1-202ENST00000393240 SYNE4Q8N205 404 aa11.8□□□□□ -0.52
SYT1-202ENST00000393240 DBNLQ9UJU6 430 aaKnown RBP11.8□□□□□ -0.52
SYT1-202ENST00000393240 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
SYT1-202ENST00000393240 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
SYT1-202ENST00000393240 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
SYT1-202ENST00000393240 CCNL1Q9UK58 526 aaPredicted RBP11.8□□□□□ -0.52
SYT1-202ENST00000393240 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
SYT1-202ENST00000393240 BTAF1O14981 1849 aa11.79□□□□□ -0.52
SYT1-202ENST00000393240 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
SYT1-202ENST00000393240 HIP1O00291 1037 aa11.79□□□□□ -0.52
SYT1-202ENST00000393240 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
SYT1-202ENST00000393240 CEP126Q9P2H0 1117 aa11.79□□□□□ -0.52
SYT1-202ENST00000393240 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
SYT1-202ENST00000393240 SGSM2O43147 1006 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 ITGA6P23229 1130 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
SYT1-202ENST00000393240 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 ZNF772Q68DY9 489 aaPredicted RBP11.78□□□□□ -0.52
SYT1-202ENST00000393240 RUFY2Q8WXA3 655 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 PUS3Q9BZE2 481 aaKnown RBP11.78□□□□□ -0.52
SYT1-202ENST00000393240 GREM2Q9H772 168 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 NTSR2O95665 410 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 KCNQ4P56696 695 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 RABEP1Q15276 862 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
SYT1-202ENST00000393240 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
SYT1-202ENST00000393240 RIPOR2Q9Y4F9 1068 aa11.77□□□□□ -0.53
SYT1-202ENST00000393240 MCCP23508 829 aa11.77□□□□□ -0.53
SYT1-202ENST00000393240 HSCBQ8IWL3 235 aa11.77□□□□□ -0.53
SYT1-202ENST00000393240 IL17RAQ96F46 866 aa11.77□□□□□ -0.53
SYT1-202ENST00000393240 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
SYT1-202ENST00000393240 ANAPC15P60006 121 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 IL27Q8NEV9 243 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 HAUS7Q99871 368 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
SYT1-202ENST00000393240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYT1-202ENST00000393240 NEUROD6Q96NK8 337 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
SYT1-202ENST00000393240 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 ZNF609O15014 1411 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 LY75O60449 1722 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
SYT1-202ENST00000393240 A0A1B0GUL7 405 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 GNPATO15228 680 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
SYT1-202ENST00000393240 TIMM10P62072 90 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
SYT1-202ENST00000393240 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 CWC27Q6UX04 472 aaKnown RBP11.75□□□□□ -0.53
SYT1-202ENST00000393240 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
SYT1-202ENST00000393240 ZPR1O75312 459 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 IL25Q9H293 177 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
SYT1-202ENST00000393240 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 RAD50Q92878 1312 aa11.74□□□□□ -0.53
SYT1-202ENST00000393240 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
SYT1-202ENST00000393240 FSD1Q9BTV5 496 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 MROH5Q6ZUA9 1318 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 HSPA4P34932 840 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 CCDC158Q5M9N0 1113 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 VGLL2Q8N8G2 317 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 NYXQ9GZU5 481 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 LRRC4BQ9NT99 713 aa11.73□□□□□ -0.53
SYT1-202ENST00000393240 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 PDE8BO95263 885 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
SYT1-202ENST00000393240 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 KBTBD3Q8NAB2 608 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
SYT1-202ENST00000393240 MYH3P11055 1940 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 LRP5O75197 1615 aa11.72□□□□□ -0.53
SYT1-202ENST00000393240 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.53
SYT1-202ENST00000393240 ST18O60284 1047 aa11.71□□□□□ -0.53
SYT1-202ENST00000393240 IFIT1P09914 478 aaKnown RBP11.71□□□□□ -0.53
SYT1-202ENST00000393240 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
SYT1-202ENST00000393240 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms