RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
MKS1-202ENST00000393119 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
MKS1-202ENST00000393119 ITGA6P23229 1130 aa18.22■□□□□ 0.51
MKS1-202ENST00000393119 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
MKS1-202ENST00000393119 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
MKS1-202ENST00000393119 CCNL1Q9UK58 526 aaPredicted RBP18.22■□□□□ 0.51
MKS1-202ENST00000393119 ATRNO75882 1429 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 THSD7AQ9UPZ6 1657 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 SNAP23O00161 211 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 ADORA1P30542 326 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 CTSWP56202 376 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
MKS1-202ENST00000393119 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
MKS1-202ENST00000393119 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
MKS1-202ENST00000393119 PHF14O94880 888 aa18.2■□□□□ 0.5
MKS1-202ENST00000393119 REC8O95072 547 aa18.2■□□□□ 0.5
MKS1-202ENST00000393119 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
MKS1-202ENST00000393119 GSE1Q14687 1217 aa18.2■□□□□ 0.5
MKS1-202ENST00000393119 LRRC4BQ9NT99 713 aa18.2■□□□□ 0.5
MKS1-202ENST00000393119 NUP98P52948 1817 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 GNPATO15228 680 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 TAF7LQ5H9L4 462 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
MKS1-202ENST00000393119 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 A0A1B0GUL7 405 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
MKS1-202ENST00000393119 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
MKS1-202ENST00000393119 SGSM2O43147 1006 aa18.18■□□□□ 0.5
MKS1-202ENST00000393119 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
MKS1-202ENST00000393119 PTH1RQ03431 593 aa18.18■□□□□ 0.5
MKS1-202ENST00000393119 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
MKS1-202ENST00000393119 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
MKS1-202ENST00000393119 NMIQ13287 307 aaPredicted RBP18.17■□□□□ 0.5
MKS1-202ENST00000393119 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
MKS1-202ENST00000393119 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
MKS1-202ENST00000393119 A0A0D9SFI3 127 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 PDE8AO60658 829 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 TRIM37O94972 964 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 NTSR2O95665 410 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 DIAPH3Q9NSV4 1193 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 BRPF3Q9ULD4 1205 aa18.17■□□□□ 0.5
MKS1-202ENST00000393119 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 SEC62Q99442 399 aaKnown RBP18.16■□□□□ 0.5
MKS1-202ENST00000393119 BTAF1O14981 1849 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 ATP5JP18859 108 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
MKS1-202ENST00000393119 CEP126Q9P2H0 1117 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 RIPOR2Q9Y4F9 1068 aa18.16■□□□□ 0.5
MKS1-202ENST00000393119 SH3TC1Q8TE82 1336 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 WTIPA6NIX2 430 aaPredicted RBP18.15■□□□□ 0.5
MKS1-202ENST00000393119 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
MKS1-202ENST00000393119 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
MKS1-202ENST00000393119 SCARF1Q14162 830 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 RASEFQ8IZ41 740 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 UBE2Q2Q8WVN8 375 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
MKS1-202ENST00000393119 CNNM1Q9NRU3 951 aa18.15■□□□□ 0.5
MKS1-202ENST00000393119 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
MKS1-202ENST00000393119 METTL24Q5JXM2 366 aa18.14■□□□□ 0.49
MKS1-202ENST00000393119 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
MKS1-202ENST00000393119 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
MKS1-202ENST00000393119 ARHGEF1Q92888 912 aaKnown RBP18.14■□□□□ 0.49
MKS1-202ENST00000393119 COL4A1P02462 1669 aa18.14■□□□□ 0.49
MKS1-202ENST00000393119 GOLIM4O00461 696 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 TAF5LO75529 589 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 CIAO1O76071 339 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 SNX21Q969T3 373 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 XAGE2Q96GT9 111 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 CPA1P15085 419 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 SLC51AQ86UW1 340 aa18.13■□□□□ 0.49
MKS1-202ENST00000393119 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
MKS1-202ENST00000393119 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
MKS1-202ENST00000393119 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 KRT27Q7Z3Y8 459 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 ZNF609O15014 1411 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 RIC1Q4ADV7 1423 aa18.12■□□□□ 0.49
MKS1-202ENST00000393119 NEK4P51957 841 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 HAUS7Q99871 368 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
MKS1-202ENST00000393119 ANKRD36CQ5JPF3 1778 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 DTNBO60941 627 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 FRAT2O75474 233 aaPredicted RBP18.11■□□□□ 0.49
MKS1-202ENST00000393119 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
MKS1-202ENST00000393119 RABEP1Q15276 862 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 RREB1Q92766 1687 aa18.11■□□□□ 0.49
MKS1-202ENST00000393119 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms