RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
USP44-202ENST00000393091 ZNF646O15015 1829 aaPredicted RBP16.67■□□□□ 0.26
USP44-202ENST00000393091 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
USP44-202ENST00000393091 SRGNP10124 158 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 KCNA3P22001 575 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 DICER1Q9UPY3 1922 aaKnown RBP16.67■□□□□ 0.26
USP44-202ENST00000393091 UBE3BQ7Z3V4 1068 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 FAM89AQ96GI7 184 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
USP44-202ENST00000393091 PSME4Q14997 1843 aa16.66■□□□□ 0.26
USP44-202ENST00000393091 NPR1P16066 1061 aa16.66■□□□□ 0.26
USP44-202ENST00000393091 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
USP44-202ENST00000393091 ITPRIPQ8IWB1 547 aa16.66■□□□□ 0.26
USP44-202ENST00000393091 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 NLRP3Q96P20 1036 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 ATP8B2P98198 1209 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
USP44-202ENST00000393091 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
USP44-202ENST00000393091 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
USP44-202ENST00000393091 EPHA10Q5JZY3 1008 aa16.64■□□□□ 0.25
USP44-202ENST00000393091 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
USP44-202ENST00000393091 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
USP44-202ENST00000393091 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 CRBNQ96SW2 442 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
USP44-202ENST00000393091 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
USP44-202ENST00000393091 CIAO1O76071 339 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
USP44-202ENST00000393091 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
USP44-202ENST00000393091 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
USP44-202ENST00000393091 COPRSQ9NQ92 184 aa16.62■□□□□ 0.25
USP44-202ENST00000393091 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
USP44-202ENST00000393091 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
USP44-202ENST00000393091 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
USP44-202ENST00000393091 SBF1O95248 1867 aa16.61■□□□□ 0.25
USP44-202ENST00000393091 GRAPQ13588 217 aa16.61■□□□□ 0.25
USP44-202ENST00000393091 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
USP44-202ENST00000393091 BBOX1O75936 387 aa16.61■□□□□ 0.25
USP44-202ENST00000393091 H0YIN7 160 aa16.6■□□□□ 0.25
USP44-202ENST00000393091 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
USP44-202ENST00000393091 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
USP44-202ENST00000393091 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
USP44-202ENST00000393091 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
USP44-202ENST00000393091 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
USP44-202ENST00000393091 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
USP44-202ENST00000393091 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
USP44-202ENST00000393091 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
USP44-202ENST00000393091 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
USP44-202ENST00000393091 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
USP44-202ENST00000393091 GREM2Q9H772 168 aa16.58■□□□□ 0.24
USP44-202ENST00000393091 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
USP44-202ENST00000393091 PTPN12Q05209 780 aaKnown RBP16.57■□□□□ 0.24
USP44-202ENST00000393091 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
USP44-202ENST00000393091 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
USP44-202ENST00000393091 GTF2E1P29083 439 aaPredicted RBP16.57■□□□□ 0.24
USP44-202ENST00000393091 C15orf52Q6ZUT6 534 aaKnown RBP16.57■□□□□ 0.24
USP44-202ENST00000393091 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
USP44-202ENST00000393091 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
USP44-202ENST00000393091 DPEP1P16444 411 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 ITGA6P23229 1130 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 IRS2Q9Y4H2 1338 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 DDX46Q7L014 1031 aaKnown RBP16.56■□□□□ 0.24
USP44-202ENST00000393091 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 RPGRQ92834 1020 aaKnown RBP16.56■□□□□ 0.24
USP44-202ENST00000393091 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
USP44-202ENST00000393091 IFIT5Q13325 482 aaKnown RBP16.55■□□□□ 0.24
USP44-202ENST00000393091 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
USP44-202ENST00000393091 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
USP44-202ENST00000393091 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 HMMRO75330 724 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 RPS8P62241 208 aaKnown RBP16.54■□□□□ 0.24
USP44-202ENST00000393091 ZNF609O15014 1411 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 TIAM2Q8IVF5 1701 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
USP44-202ENST00000393091 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
USP44-202ENST00000393091 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
USP44-202ENST00000393091 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
USP44-202ENST00000393091 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
USP44-202ENST00000393091 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
USP44-202ENST00000393091 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
USP44-202ENST00000393091 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
USP44-202ENST00000393091 PSMD1Q99460 953 aa16.52■□□□□ 0.24
USP44-202ENST00000393091 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.23
USP44-202ENST00000393091 EYA2O00167 538 aa16.52■□□□□ 0.23
USP44-202ENST00000393091 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.23
USP44-202ENST00000393091 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms