RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
SHTN1-204ENST00000392903 PYCARDQ9ULZ3 195 aa17.87■□□□□ 0.45
SHTN1-204ENST00000392903 RAD50Q92878 1312 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 SNX14Q9Y5W7 946 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 SYCP1Q15431 976 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
SHTN1-204ENST00000392903 OGFRQ9NZT2 677 aa17.86■□□□□ 0.45
SHTN1-204ENST00000392903 CPDO75976 1380 aa17.85■□□□□ 0.45
SHTN1-204ENST00000392903 ZCRB1Q8TBF4 217 aaKnown RBP17.85■□□□□ 0.45
SHTN1-204ENST00000392903 STRN4Q9NRL3 753 aa17.85■□□□□ 0.45
SHTN1-204ENST00000392903 PTH1RQ03431 593 aa17.84■□□□□ 0.45
SHTN1-204ENST00000392903 BOLA2Q9H3K6 86 aa17.84■□□□□ 0.45
SHTN1-204ENST00000392903 GOLGA6L6A8MZA4 724 aa17.84■□□□□ 0.45
SHTN1-204ENST00000392903 EPB41L2O43491 1005 aaKnown RBP17.84■□□□□ 0.45
SHTN1-204ENST00000392903 CPA1P15085 419 aa17.84■□□□□ 0.45
SHTN1-204ENST00000392903 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
SHTN1-204ENST00000392903 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
SHTN1-204ENST00000392903 A0A087WZG4 1122 aa17.83■□□□□ 0.45
SHTN1-204ENST00000392903 AP5Z1O43299 807 aa17.83■□□□□ 0.45
SHTN1-204ENST00000392903 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.45
SHTN1-204ENST00000392903 XIRP1Q702N8 1843 aaKnown RBP17.83■□□□□ 0.45
SHTN1-204ENST00000392903 ZSCAN22P10073 491 aaPredicted RBP17.83■□□□□ 0.44
SHTN1-204ENST00000392903 EVI5LQ96CN4 794 aa17.83■□□□□ 0.44
SHTN1-204ENST00000392903 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
SHTN1-204ENST00000392903 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
SHTN1-204ENST00000392903 NBPF14Q5TI25 921 aa17.82■□□□□ 0.44
SHTN1-204ENST00000392903 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
SHTN1-204ENST00000392903 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
SHTN1-204ENST00000392903 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
SHTN1-204ENST00000392903 GABPB1Q06547 395 aaPredicted RBP17.81■□□□□ 0.44
SHTN1-204ENST00000392903 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
SHTN1-204ENST00000392903 A1BGP04217 495 aa17.81■□□□□ 0.44
SHTN1-204ENST00000392903 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
SHTN1-204ENST00000392903 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 CASTP20810 708 aaKnown RBP17.8■□□□□ 0.44
SHTN1-204ENST00000392903 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
SHTN1-204ENST00000392903 PKD1L3Q7Z443 1732 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 MRC1P22897 1456 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 DTNBO60941 627 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 AK2P54819 239 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 EVA1CP58658 441 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 PLBD2Q8NHP8 589 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 ATP6V1DQ9Y5K8 247 aa17.8■□□□□ 0.44
SHTN1-204ENST00000392903 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
SHTN1-204ENST00000392903 TFCP2Q12800 502 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
SHTN1-204ENST00000392903 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 CHMP3Q9Y3E7 222 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
SHTN1-204ENST00000392903 NDUFB9Q9Y6M9 179 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
SHTN1-204ENST00000392903 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
SHTN1-204ENST00000392903 AFDNP55196 1824 aaKnown RBP17.78■□□□□ 0.44
SHTN1-204ENST00000392903 STX6O43752 255 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 IL2RBP14784 551 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
SHTN1-204ENST00000392903 BBXQ8WY36 941 aaPredicted RBP17.78■□□□□ 0.44
SHTN1-204ENST00000392903 SMTNL1A8MU46 457 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 F13A1P00488 732 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 KCNJ4P48050 445 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
SHTN1-204ENST00000392903 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
SHTN1-204ENST00000392903 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 TTC14Q96N46 770 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
SHTN1-204ENST00000392903 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
SHTN1-204ENST00000392903 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
SHTN1-204ENST00000392903 JAKMIP1Q96N16 626 aaKnown RBP17.77■□□□□ 0.44
SHTN1-204ENST00000392903 ABCC6O95255 1503 aa17.77■□□□□ 0.43
SHTN1-204ENST00000392903 A0A0D9SFI3 127 aa17.77■□□□□ 0.43
SHTN1-204ENST00000392903 IGSF3O75054 1194 aa17.77■□□□□ 0.43
SHTN1-204ENST00000392903 SYT1P21579 422 aa17.77■□□□□ 0.43
SHTN1-204ENST00000392903 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.43
SHTN1-204ENST00000392903 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.43
SHTN1-204ENST00000392903 DDX41Q9UJV9 622 aaKnown RBP17.77■□□□□ 0.43
SHTN1-204ENST00000392903 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.43
SHTN1-204ENST00000392903 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.43
SHTN1-204ENST00000392903 ERVV-2B6SEH9 535 aa17.76■□□□□ 0.43
SHTN1-204ENST00000392903 CCDC192P0DO97 292 aa17.76■□□□□ 0.43
SHTN1-204ENST00000392903 FIBPO43427 364 aa17.76■□□□□ 0.43
SHTN1-204ENST00000392903 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
SHTN1-204ENST00000392903 ARFGEF2Q9Y6D5 1785 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 RABL6Q3YEC7 729 aaPredicted RBP17.75■□□□□ 0.43
SHTN1-204ENST00000392903 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 LIMCH1Q9UPQ0 1083 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
SHTN1-204ENST00000392903 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
SHTN1-204ENST00000392903 PTGS1P23219 599 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 CASP7P55210 303 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms