RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 LRP6O75581 1613 aa30.75■■■□□ 2.51
SMARCD3-203ENST00000392811 RFX7Q2KHR2 1363 aa30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 EYA2O00167 538 aa30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 SLC27A2O14975 620 aa30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 MRE11P49959 708 aa30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 LRRC24Q50LG9 513 aa30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 PRPF40AO75400 957 aaKnown RBP30.74■■■□□ 2.51
SMARCD3-203ENST00000392811 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.73■■■□□ 2.51
SMARCD3-203ENST00000392811 NEUROD6Q96NK8 337 aa30.73■■■□□ 2.51
SMARCD3-203ENST00000392811 EXOC5O00471 708 aa30.73■■■□□ 2.51
SMARCD3-203ENST00000392811 CCDC9Q9Y3X0 531 aaKnown RBP30.73■■■□□ 2.51
SMARCD3-203ENST00000392811 RPAP1Q9BWH6 1393 aaPredicted RBP30.72■■■□□ 2.51
SMARCD3-203ENST00000392811 CIAO1O76071 339 aa30.72■■■□□ 2.51
SMARCD3-203ENST00000392811 GAS2L3Q86XJ1 694 aa30.72■■■□□ 2.51
SMARCD3-203ENST00000392811 SLC4A9Q96Q91 983 aa30.72■■■□□ 2.51
SMARCD3-203ENST00000392811 TAF5LO75529 589 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 TIMM10P62072 90 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 GRPEL1Q9HAV7 217 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 WNK3Q9BYP7 1800 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 LARGE1O95461 756 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 MAP3K15Q6ZN16 1313 aa30.71■■■□□ 2.51
SMARCD3-203ENST00000392811 ZNF609O15014 1411 aa30.7■■■□□ 2.51
SMARCD3-203ENST00000392811 PCCAP05165 728 aaPredicted RBP30.7■■■□□ 2.51
SMARCD3-203ENST00000392811 RNF20Q5VTR2 975 aa30.7■■■□□ 2.51
SMARCD3-203ENST00000392811 DDX46Q7L014 1031 aaKnown RBP30.7■■■□□ 2.51
SMARCD3-203ENST00000392811 PUS3Q9BZE2 481 aaKnown RBP30.7■■■□□ 2.51
SMARCD3-203ENST00000392811 PANK2Q9BZ23 570 aa30.69■■■□□ 2.5
SMARCD3-203ENST00000392811 CYP19A1P11511 503 aaPredicted RBP30.69■■■□□ 2.5
SMARCD3-203ENST00000392811 FAM89AQ96GI7 184 aa30.69■■■□□ 2.5
SMARCD3-203ENST00000392811 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.69■■■□□ 2.5
SMARCD3-203ENST00000392811 CHGBP05060 677 aa30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 NCLP19338 710 aaKnown RBP30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 GIGYF2Q6Y7W6 1299 aaKnown RBP30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 WDR33Q9C0J8 1336 aaKnown RBP30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 PSMA5P28066 241 aa30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 CCDC57Q2TAC2 916 aa30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 KBTBD3Q8NAB2 608 aa30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 SYTL4Q96C24 671 aaPredicted RBP30.68■■■□□ 2.5
SMARCD3-203ENST00000392811 ZBTB38Q8NAP3 1195 aaPredicted RBP30.67■■■□□ 2.5
SMARCD3-203ENST00000392811 ZSCAN31Q96LW9 406 aaPredicted RBP30.67■■■□□ 2.5
SMARCD3-203ENST00000392811 TAF6LQ9Y6J9 622 aa30.67■■■□□ 2.5
SMARCD3-203ENST00000392811 HLFQ16534 295 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 GPT2Q8TD30 523 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 PLA2G12BQ9BX93 195 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 KAT6BQ8WYB5 2073 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 COL9A3Q14050 684 aaPredicted RBP30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 USPL1Q5W0Q7 1092 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 SH2B1Q9NRF2 756 aaPredicted RBP30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 HMG20BQ9P0W2 317 aa30.66■■■□□ 2.5
SMARCD3-203ENST00000392811 A0A1B0GUL7 405 aa30.65■■■□□ 2.5
SMARCD3-203ENST00000392811 CAVIN1Q6NZI2 390 aaKnown RBP30.65■■■□□ 2.5
SMARCD3-203ENST00000392811 SEC62Q99442 399 aaKnown RBP30.65■■■□□ 2.5
SMARCD3-203ENST00000392811 PALLDQ8WX93 1383 aa30.65■■■□□ 2.5
SMARCD3-203ENST00000392811 CCDC129Q6ZRS4 1044 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 CCDC83Q8IWF9 413 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 PAG1Q9NWQ8 432 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 SMC3Q9UQE7 1217 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 GOLIM4O00461 696 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 TSGA10IPQ3SY00 556 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 MCMDC2Q4G0Z9 681 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 CEP126Q9P2H0 1117 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 ZBTB1Q9Y2K1 713 aa30.64■■■□□ 2.5
SMARCD3-203ENST00000392811 CSF1RP07333 972 aa30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 PRIM1P49642 420 aaKnown RBP30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 CCDC85AQ96PX6 553 aaPredicted RBP30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 DOT1LQ8TEK3 1739 aa30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 GPTP24298 496 aa30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 BLOC1S2Q6QNY1 142 aa30.63■■■□□ 2.49
SMARCD3-203ENST00000392811 ME3Q16798 604 aa30.62■■■□□ 2.49
SMARCD3-203ENST00000392811 NLRP10Q86W26 655 aa30.62■■■□□ 2.49
SMARCD3-203ENST00000392811 FBXO3Q9UK99 471 aa30.62■■■□□ 2.49
SMARCD3-203ENST00000392811 SYNE4Q8N205 404 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 RTN4Q9NQC3 1192 aaKnown RBP30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 TPCN1Q9ULQ1 816 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 SH3TC1Q8TE82 1336 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 CDHR2Q9BYE9 1310 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 ADAMTS2O95450 1211 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 RPS6KB1P23443 525 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 ST3GAL1Q11201 340 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 HSP90AB3PQ58FF7 597 aa30.61■■■□□ 2.49
SMARCD3-203ENST00000392811 IFIT1P09914 478 aaKnown RBP30.6■■■□□ 2.49
SMARCD3-203ENST00000392811 SYT1P21579 422 aa30.6■■■□□ 2.49
SMARCD3-203ENST00000392811 ZSCAN23Q3MJ62 389 aa30.6■■■□□ 2.49
SMARCD3-203ENST00000392811 ANKRD36CQ5JPF3 1778 aa30.6■■■□□ 2.49
SMARCD3-203ENST00000392811 U3KPZ7 1027 aaPredicted RBP30.59■■■□□ 2.49
SMARCD3-203ENST00000392811 STX6O43752 255 aa30.59■■■□□ 2.49
SMARCD3-203ENST00000392811 ZNF445P59923 1031 aa30.59■■■□□ 2.49
SMARCD3-203ENST00000392811 IFIT5Q13325 482 aaKnown RBP30.59■■■□□ 2.49
SMARCD3-203ENST00000392811 NRAPQ86VF7 1730 aa30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 SPATA31A1Q5TZJ5 1347 aa30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 ZSCAN22P10073 491 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 FOXD4L6Q3SYB3 417 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 TAF7LQ5H9L4 462 aa30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 FOXD4L3Q6VB84 417 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 TCEANC2Q96MN5 208 aa30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 CDCA7Q9BWT1 371 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 ALDH8A1Q9H2A2 487 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-203ENST00000392811 GJB2P29033 226 aa30.57■■■□□ 2.49
SMARCD3-203ENST00000392811 RBM27Q9P2N5 1060 aaKnown RBP30.57■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms