RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
BRF1-204ENST00000392557 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 UBE2HP62256 183 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 CBX1P83916 185 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 FGD1P98174 961 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 HSPA4P34932 840 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 FAM173BQ6P4H8 233 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 TLR7Q9NYK1 1049 aaKnown RBP12.9□□□□□ -0.34
BRF1-204ENST00000392557 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
BRF1-204ENST00000392557 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.35
BRF1-204ENST00000392557 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
BRF1-204ENST00000392557 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 TERF1P54274 439 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
BRF1-204ENST00000392557 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 CPDO75976 1380 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 F13A1P00488 732 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
BRF1-204ENST00000392557 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
BRF1-204ENST00000392557 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
BRF1-204ENST00000392557 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
BRF1-204ENST00000392557 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 SASH1O94885 1247 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
BRF1-204ENST00000392557 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
BRF1-204ENST00000392557 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 TFIP11Q9UBB9 837 aaKnown RBP12.88□□□□□ -0.35
BRF1-204ENST00000392557 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
BRF1-204ENST00000392557 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
BRF1-204ENST00000392557 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
BRF1-204ENST00000392557 SGSM2O43147 1006 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
BRF1-204ENST00000392557 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 ZNF592Q92610 1267 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 MTX1Q13505 466 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 BICD2Q8TD16 824 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
BRF1-204ENST00000392557 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
BRF1-204ENST00000392557 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 KDM4AO75164 1064 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 LARGE1O95461 756 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 RAD50Q92878 1312 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
BRF1-204ENST00000392557 TRIM5Q9C035 493 aa12.86□□□□□ -0.35
BRF1-204ENST00000392557 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 COL18A1P39060 1754 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 PTH1RQ03431 593 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 TFCP2Q12800 502 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 AOX1Q06278 1338 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 KRT85P78386 507 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
BRF1-204ENST00000392557 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 MYRIPQ8NFW9 859 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 TNMDQ9H2S6 317 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 C5P01031 1676 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 GPTP24298 496 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
BRF1-204ENST00000392557 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
BRF1-204ENST00000392557 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
BRF1-204ENST00000392557 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.35
BRF1-204ENST00000392557 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
BRF1-204ENST00000392557 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
BRF1-204ENST00000392557 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
BRF1-204ENST00000392557 H3BQV1 296 aa12.83□□□□□ -0.36
BRF1-204ENST00000392557 IFFO2Q5TF58 517 aa12.83□□□□□ -0.36
BRF1-204ENST00000392557 C16orf45Q96MC5 204 aaPredicted RBP12.83□□□□□ -0.36
BRF1-204ENST00000392557 LSG1Q9H089 658 aaKnown RBP12.83□□□□□ -0.36
BRF1-204ENST00000392557 PIGBQ92521 554 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 PTGS1P23219 599 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms