RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
RFC4-202ENST00000392481 NMRK2Q9NPI5 230 aa15.1■□□□□ 0.01
RFC4-202ENST00000392481 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
RFC4-202ENST00000392481 PDE8AO60658 829 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 DPY19L2Q6NUT2 758 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 SP8Q8IXZ3 490 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 TAF1P21675 1872 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
RFC4-202ENST00000392481 GCKRQ14397 625 aa15.09■□□□□ 0.01
RFC4-202ENST00000392481 JARID2Q92833 1246 aaPredicted RBP15.09■□□□□ 0.01
RFC4-202ENST00000392481 H7C1W4 665 aa15.08■□□□□ 0
RFC4-202ENST00000392481 CCDC152Q4G0S7 254 aa15.08■□□□□ 0
RFC4-202ENST00000392481 SLC51AQ86UW1 340 aa15.08■□□□□ 0
RFC4-202ENST00000392481 F6X3S4 739 aa15.07■□□□□ 0
RFC4-202ENST00000392481 CELF1Q92879 486 aaKnown RBP15.07■□□□□ 0
RFC4-202ENST00000392481 RTFDC1Q9BY42 306 aaPredicted RBP15.07■□□□□ 0
RFC4-202ENST00000392481 RRAGCQ9HB90 399 aa15.07■□□□□ 0
RFC4-202ENST00000392481 RPS8P62241 208 aaKnown RBP15.06■□□□□ 0
RFC4-202ENST00000392481 DPP8Q6V1X1 898 aaPredicted RBP15.06■□□□□ 0
RFC4-202ENST00000392481 UBE3BQ7Z3V4 1068 aa15.06■□□□□ 0
RFC4-202ENST00000392481 MPNDQ8N594 471 aa15.06■□□□□ 0
RFC4-202ENST00000392481 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
RFC4-202ENST00000392481 JDP2Q8WYK2 163 aa15.06■□□□□ 0
RFC4-202ENST00000392481 VPS33BQ9H267 617 aa15.06■□□□□ 0
RFC4-202ENST00000392481 TOMM70O94826 608 aa15.05■□□□□ -0
RFC4-202ENST00000392481 CT47B1P0C2W7 299 aaPredicted RBP15.05■□□□□ -0
RFC4-202ENST00000392481 VEGFAP15692 232 aaPredicted RBP15.05■□□□□ -0
RFC4-202ENST00000392481 CTSWP56202 376 aa15.05■□□□□ -0
RFC4-202ENST00000392481 BEND3Q5T5X7 828 aa15.05■□□□□ -0
RFC4-202ENST00000392481 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
RFC4-202ENST00000392481 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
RFC4-202ENST00000392481 LRRC37AA6NMS7 1700 aa15.05■□□□□ -0
RFC4-202ENST00000392481 MYH3P11055 1940 aa15.04■□□□□ -0
RFC4-202ENST00000392481 FZD9O00144 591 aa15.04■□□□□ -0
RFC4-202ENST00000392481 CASP7P55210 303 aa15.04■□□□□ -0
RFC4-202ENST00000392481 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
RFC4-202ENST00000392481 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
RFC4-202ENST00000392481 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
RFC4-202ENST00000392481 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
RFC4-202ENST00000392481 PLA2G12BQ9BX93 195 aa15.04■□□□□ -0
RFC4-202ENST00000392481 SEC31BQ9NQW1 1179 aa15.04■□□□□ -0
RFC4-202ENST00000392481 WDR90Q96KV7 1748 aa15.04■□□□□ -0
RFC4-202ENST00000392481 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
RFC4-202ENST00000392481 RTL9Q8NET4 1388 aa15.03■□□□□ -0
RFC4-202ENST00000392481 COL4A1P02462 1669 aa15.02■□□□□ -0
RFC4-202ENST00000392481 PTPRCP08575 1304 aa15.02■□□□□ -0
RFC4-202ENST00000392481 PPIP5K2O43314 1243 aa15.02■□□□□ -0
RFC4-202ENST00000392481 ALDH1L1O75891 902 aa15.02■□□□□ -0
RFC4-202ENST00000392481 RBM46Q8TBY0 533 aaKnown RBP15.02■□□□□ -0
RFC4-202ENST00000392481 CCDC85AQ96PX6 553 aaPredicted RBP15.02■□□□□ -0
RFC4-202ENST00000392481 COL4A5P29400 1685 aa15.02□□□□□ -0.01
RFC4-202ENST00000392481 ZNF541Q9H0D2 1346 aa15.02□□□□□ -0.01
RFC4-202ENST00000392481 POTECB2RU33 542 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 KIAA2012Q0VF49 1180 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 AOC3Q16853 763 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 SLC4A10Q6U841 1118 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 ANKRD18AQ8IVF6 992 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 NIM1KQ8IY84 436 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 L3MBTL3Q96JM7 780 aaPredicted RBP15.01□□□□□ -0.01
RFC4-202ENST00000392481 CDC5LQ99459 802 aaKnown RBP15.01□□□□□ -0.01
RFC4-202ENST00000392481 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 NSFL1CQ9UNZ2 370 aaKnown RBP15.01□□□□□ -0.01
RFC4-202ENST00000392481 CEP350Q5VT06 3117 aa15.01□□□□□ -0.01
RFC4-202ENST00000392481 EIF6P56537 245 aaKnown RBP15□□□□□ -0.01
RFC4-202ENST00000392481 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
RFC4-202ENST00000392481 GPC2Q8N158 579 aa15□□□□□ -0.01
RFC4-202ENST00000392481 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
RFC4-202ENST00000392481 GREM2Q9H772 168 aa15□□□□□ -0.01
RFC4-202ENST00000392481 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
RFC4-202ENST00000392481 DUOX1Q9NRD9 1551 aa15□□□□□ -0.01
RFC4-202ENST00000392481 GRM8O00222 908 aa15□□□□□ -0.01
RFC4-202ENST00000392481 CSF1RP07333 972 aa15□□□□□ -0.01
RFC4-202ENST00000392481 GPSM2P81274 684 aa15□□□□□ -0.01
RFC4-202ENST00000392481 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
RFC4-202ENST00000392481 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
RFC4-202ENST00000392481 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
RFC4-202ENST00000392481 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
RFC4-202ENST00000392481 FSTL1Q12841 308 aa14.99□□□□□ -0.01
RFC4-202ENST00000392481 BSDC1Q9NW68 430 aaPredicted RBP14.99□□□□□ -0.01
RFC4-202ENST00000392481 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
RFC4-202ENST00000392481 POLLQ9UGP5 575 aa14.99□□□□□ -0.01
RFC4-202ENST00000392481 ZNRF3Q9ULT6 936 aa14.99□□□□□ -0.01
RFC4-202ENST00000392481 LTBP1Q14766 1721 aa14.98□□□□□ -0.01
RFC4-202ENST00000392481 WASHC4Q2M389 1173 aa14.98□□□□□ -0.01
RFC4-202ENST00000392481 TBC1D16Q8TBP0 767 aa14.98□□□□□ -0.01
RFC4-202ENST00000392481 ANKIB1Q9P2G1 1089 aa14.98□□□□□ -0.01
RFC4-202ENST00000392481 SCN4AP35499 1836 aa14.98□□□□□ -0.01
RFC4-202ENST00000392481 HSPA6P17066 643 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 ITGA6P23229 1130 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 FOXO4P98177 505 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 EYA3Q99504 573 aa14.97□□□□□ -0.01
RFC4-202ENST00000392481 XDHP47989 1333 aa14.96□□□□□ -0.01
RFC4-202ENST00000392481 IGHMBP2P38935 993 aaKnown RBP14.96□□□□□ -0.01
RFC4-202ENST00000392481 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
RFC4-202ENST00000392481 CXCL9Q07325 125 aa14.96□□□□□ -0.01
RFC4-202ENST00000392481 TAF1DQ9H5J8 278 aaPredicted RBP14.96□□□□□ -0.01
RFC4-202ENST00000392481 GGA1Q9UJY5 639 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms