RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PDE1AP54750 535 aa24.11■■□□□ 1.45
CSNK1D-203ENST00000392334 FOXO4P98177 505 aa24.11■■□□□ 1.45
CSNK1D-203ENST00000392334 KIF1BPQ96EK5 621 aa24.11■■□□□ 1.45
CSNK1D-203ENST00000392334 CWC22Q9HCG8 908 aaKnown RBP24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 NUP98P52948 1817 aa24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 RPS6KA4O75676 772 aa24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 SDSP20132 328 aa24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 HSP90AB4PQ58FF6 505 aa24.1■■□□□ 1.45
CSNK1D-203ENST00000392334 MX1P20591 662 aa24.09■■□□□ 1.45
CSNK1D-203ENST00000392334 RABL6Q3YEC7 729 aaPredicted RBP24.09■■□□□ 1.45
CSNK1D-203ENST00000392334 NLRP10Q86W26 655 aa24.09■■□□□ 1.45
CSNK1D-203ENST00000392334 CCDC85AQ96PX6 553 aaPredicted RBP24.09■■□□□ 1.45
CSNK1D-203ENST00000392334 FAM177BA6PVY3 158 aa24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 ESPNB1AK53 854 aa24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 PHF14O94880 888 aa24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 G3BP1Q13283 466 aaKnown RBP eCLIP24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 OSBPL3Q9H4L5 887 aa24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 RTCBQ9Y3I0 505 aaKnown RBP24.08■■□□□ 1.45
CSNK1D-203ENST00000392334 TRIM28Q13263 835 aaKnown RBP24.08■■□□□ 1.44
CSNK1D-203ENST00000392334 AK7Q96M32 723 aa24.08■■□□□ 1.44
CSNK1D-203ENST00000392334 SALL3Q9BXA9 1300 aa24.07■■□□□ 1.44
CSNK1D-203ENST00000392334 ERVV-1B6SEH8 477 aa24.07■■□□□ 1.44
CSNK1D-203ENST00000392334 SASH1O94885 1247 aa24.07■■□□□ 1.44
CSNK1D-203ENST00000392334 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
CSNK1D-203ENST00000392334 EN1Q05925 392 aaPredicted RBP24.07■■□□□ 1.44
CSNK1D-203ENST00000392334 REC8O95072 547 aa24.06■■□□□ 1.44
CSNK1D-203ENST00000392334 RFX5P48382 616 aaPredicted RBP24.06■■□□□ 1.44
CSNK1D-203ENST00000392334 PTPN12Q05209 780 aaKnown RBP24.06■■□□□ 1.44
CSNK1D-203ENST00000392334 HSP90AB3PQ58FF7 597 aa24.06■■□□□ 1.44
CSNK1D-203ENST00000392334 ZBTB38Q8NAP3 1195 aaPredicted RBP24.06■■□□□ 1.44
CSNK1D-203ENST00000392334 UBN2Q6ZU65 1347 aa24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 ST18O60284 1047 aa24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 PCCAP05165 728 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 PRKCSHP14314 528 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 EZH2Q15910 746 aaKnown RBP24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 ARHGEF1Q92888 912 aaKnown RBP24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 PPP1R9BQ96SB3 815 aa24.05■■□□□ 1.44
CSNK1D-203ENST00000392334 CLASRPQ8N2M8 674 aaKnown RBP24.04■■□□□ 1.44
CSNK1D-203ENST00000392334 SRP68Q9UHB9 627 aaKnown RBP24.04■■□□□ 1.44
CSNK1D-203ENST00000392334 DDX49Q9Y6V7 483 aaKnown RBP24.04■■□□□ 1.44
CSNK1D-203ENST00000392334 UBR3Q6ZT12 1888 aa24.04■■□□□ 1.44
CSNK1D-203ENST00000392334 ZNF445P59923 1031 aa24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 CCDC173Q0VFZ6 552 aa24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 TRIM44Q96DX7 344 aaPredicted RBP24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 ZNF594Q96JF6 807 aaPredicted RBP24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 DEFB132Q7Z7B7 95 aa24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 ERC1Q8IUD2 1116 aa24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 ZNF34Q8IZ26 560 aa24.03■■□□□ 1.44
CSNK1D-203ENST00000392334 ANKRD36CQ5JPF3 1778 aa24.02■■□□□ 1.44
CSNK1D-203ENST00000392334 TUBGCP6Q96RT7 1819 aa24.02■■□□□ 1.44
CSNK1D-203ENST00000392334 ERC2O15083 957 aa24.02■■□□□ 1.44
CSNK1D-203ENST00000392334 COPRSQ9NQ92 184 aa24.02■■□□□ 1.44
CSNK1D-203ENST00000392334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 MAP4K4O95819 1239 aaPredicted RBP24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 ZNF827Q17R98 1081 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 USPL1Q5W0Q7 1092 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 AACSQ86V21 672 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 C4AP0C0L4 1744 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 TRAPPC3LQ5T215 181 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 SUSD4Q5VX71 490 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 CCDC8Q9H0W5 538 aaPredicted RBP24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 BCORQ6W2J9 1755 aa24.01■■□□□ 1.43
CSNK1D-203ENST00000392334 AK9Q5TCS8 1911 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 TRIM6-TRIM34B2RNG4 842 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 BCL2L12Q9HB09 334 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 LMBRD1Q9NUN5 540 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 STAP2Q9UGK3 403 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
CSNK1D-203ENST00000392334 IFIT2P09913 472 aaKnown RBP24■■□□□ 1.43
CSNK1D-203ENST00000392334 RILPL2Q969X0 211 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 EAF2Q96CJ1 260 aaPredicted RBP24■■□□□ 1.43
CSNK1D-203ENST00000392334 NARFQ9UHQ1 456 aa24■■□□□ 1.43
CSNK1D-203ENST00000392334 RGPD3A6NKT7 1758 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-203ENST00000392334 RGPD4Q7Z3J3 1758 aa23.99■■□□□ 1.43
CSNK1D-203ENST00000392334 IRS4O14654 1257 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-203ENST00000392334 TFCP2Q12800 502 aa23.99■■□□□ 1.43
CSNK1D-203ENST00000392334 SF3B2Q13435 895 aaKnown RBP23.99■■□□□ 1.43
CSNK1D-203ENST00000392334 RFC4P35249 363 aa23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 NASPP49321 788 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 TLR7Q9NYK1 1049 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 ZPR1O75312 459 aa23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 MCTP1Q6DN14 999 aa23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 BICDL1Q6ZP65 573 aa23.98■■□□□ 1.43
CSNK1D-203ENST00000392334 AKT1S1Q96B36 256 aa23.97■■□□□ 1.43
CSNK1D-203ENST00000392334 TFCP2L1Q9NZI6 479 aa23.97■■□□□ 1.43
CSNK1D-203ENST00000392334 CCDC57Q2TAC2 916 aa23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 LRRC24Q50LG9 513 aa23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 PI4K2BQ8TCG2 481 aa23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 NAP1L5Q96NT1 182 aaPredicted RBP23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 PUS3Q9BZE2 481 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 SCN7AQ01118 1682 aa23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 ZNF652Q9Y2D9 606 aa23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 USP42Q9H9J4 1324 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-203ENST00000392334 TBC1D9BQ66K14 1250 aa23.95■■□□□ 1.42
CSNK1D-203ENST00000392334 CLEC4GQ6UXB4 293 aa23.95■■□□□ 1.42
CSNK1D-203ENST00000392334 BAG6P46379 1132 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms