RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CTSWP56202 376 aa18.75■□□□□ 0.59
SUMO1-203ENST00000392246 CCDC152Q4G0S7 254 aa18.75■□□□□ 0.59
SUMO1-203ENST00000392246 CNKSR1Q969H4 720 aa18.75■□□□□ 0.59
SUMO1-203ENST00000392246 RBM17Q96I25 401 aaKnown RBP18.75■□□□□ 0.59
SUMO1-203ENST00000392246 MEIS3Q99687 375 aa18.75■□□□□ 0.59
SUMO1-203ENST00000392246 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
SUMO1-203ENST00000392246 C20orf194Q5TEA3 1177 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
SUMO1-203ENST00000392246 TTLL6Q8N841 843 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 TTLL11Q8NHH1 800 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
SUMO1-203ENST00000392246 FOXO4P98177 505 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
SUMO1-203ENST00000392246 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
SUMO1-203ENST00000392246 CSF1RP07333 972 aa18.73■□□□□ 0.59
SUMO1-203ENST00000392246 DALRD3Q5D0E6 543 aaKnown RBP18.73■□□□□ 0.59
SUMO1-203ENST00000392246 KAZALD1Q96I82 304 aa18.73■□□□□ 0.59
SUMO1-203ENST00000392246 DDX19BQ9UMR2 479 aa18.73■□□□□ 0.59
SUMO1-203ENST00000392246 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
SUMO1-203ENST00000392246 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
SUMO1-203ENST00000392246 CACNA1SQ13698 1873 aa18.72■□□□□ 0.59
SUMO1-203ENST00000392246 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
SUMO1-203ENST00000392246 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
SUMO1-203ENST00000392246 BICC1Q9H694 974 aaKnown RBP18.71■□□□□ 0.59
SUMO1-203ENST00000392246 WWC3Q9ULE0 1092 aa18.71■□□□□ 0.59
SUMO1-203ENST00000392246 TAF1P21675 1872 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
SUMO1-203ENST00000392246 RABL6Q3YEC7 729 aaPredicted RBP18.7■□□□□ 0.58
SUMO1-203ENST00000392246 GREM2Q9H772 168 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
SUMO1-203ENST00000392246 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
SUMO1-203ENST00000392246 GNAI2P04899 355 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 GRAPQ13588 217 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 PRPF40BQ6NWY9 871 aaKnown RBP18.69■□□□□ 0.58
SUMO1-203ENST00000392246 GRAPLQ8TC17 118 aaPredicted RBP18.69■□□□□ 0.58
SUMO1-203ENST00000392246 BBOX1O75936 387 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
SUMO1-203ENST00000392246 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 SEC31BQ9NQW1 1179 aa18.69■□□□□ 0.58
SUMO1-203ENST00000392246 ARFGEF1Q9Y6D6 1849 aa18.68■□□□□ 0.58
SUMO1-203ENST00000392246 ITGA6P23229 1130 aa18.68■□□□□ 0.58
SUMO1-203ENST00000392246 IFIT5Q13325 482 aaKnown RBP18.68■□□□□ 0.58
SUMO1-203ENST00000392246 GPR162Q16538 588 aa18.68■□□□□ 0.58
SUMO1-203ENST00000392246 CDC5LQ99459 802 aaKnown RBP18.68■□□□□ 0.58
SUMO1-203ENST00000392246 ANKRD18BA2A2Z9 1011 aa18.67■□□□□ 0.58
SUMO1-203ENST00000392246 RPS8P62241 208 aaKnown RBP18.67■□□□□ 0.58
SUMO1-203ENST00000392246 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
SUMO1-203ENST00000392246 CELF1Q92879 486 aaKnown RBP18.67■□□□□ 0.58
SUMO1-203ENST00000392246 TMC4Q7Z404 712 aa18.66■□□□□ 0.58
SUMO1-203ENST00000392246 ANKRD18AQ8IVF6 992 aa18.66■□□□□ 0.58
SUMO1-203ENST00000392246 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
SUMO1-203ENST00000392246 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
SUMO1-203ENST00000392246 C21orf2O43822 256 aa18.65■□□□□ 0.58
SUMO1-203ENST00000392246 YBX3P16989 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
SUMO1-203ENST00000392246 ZBTB40Q9NUA8 1239 aa18.65■□□□□ 0.58
SUMO1-203ENST00000392246 IGHMBP2P38935 993 aaKnown RBP18.64■□□□□ 0.58
SUMO1-203ENST00000392246 SOGA3Q5TF21 947 aa18.64■□□□□ 0.58
SUMO1-203ENST00000392246 C7orf43Q8WVR3 580 aa18.64■□□□□ 0.58
SUMO1-203ENST00000392246 TMX4Q9H1E5 349 aaPredicted RBP18.64■□□□□ 0.58
SUMO1-203ENST00000392246 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.58
SUMO1-203ENST00000392246 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.57
SUMO1-203ENST00000392246 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
SUMO1-203ENST00000392246 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
SUMO1-203ENST00000392246 SP8Q8IXZ3 490 aa18.64■□□□□ 0.57
SUMO1-203ENST00000392246 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
SUMO1-203ENST00000392246 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
SUMO1-203ENST00000392246 COL4A1P02462 1669 aa18.63■□□□□ 0.57
SUMO1-203ENST00000392246 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
SUMO1-203ENST00000392246 MTX1Q13505 466 aa18.63■□□□□ 0.57
SUMO1-203ENST00000392246 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
SUMO1-203ENST00000392246 MPHOSPH8Q99549 860 aa18.63■□□□□ 0.57
SUMO1-203ENST00000392246 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
SUMO1-203ENST00000392246 BSDC1Q9NW68 430 aaPredicted RBP18.62■□□□□ 0.57
SUMO1-203ENST00000392246 SRGAP3O43295 1099 aa18.61■□□□□ 0.57
SUMO1-203ENST00000392246 GRIPAP1Q4V328 841 aa18.61■□□□□ 0.57
SUMO1-203ENST00000392246 CCDC93Q567U6 631 aa18.61■□□□□ 0.57
SUMO1-203ENST00000392246 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
SUMO1-203ENST00000392246 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
SUMO1-203ENST00000392246 RTKN2Q8IZC4 609 aa18.6■□□□□ 0.57
SUMO1-203ENST00000392246 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
SUMO1-203ENST00000392246 RFX5P48382 616 aaPredicted RBP18.59■□□□□ 0.57
SUMO1-203ENST00000392246 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 ARHGAP27Q6ZUM4 889 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 LRRC37AA6NMS7 1700 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
SUMO1-203ENST00000392246 FER1L6Q2WGJ9 1857 aa18.59■□□□□ 0.57
SUMO1-203ENST00000392246 PTPN12Q05209 780 aaKnown RBP18.58■□□□□ 0.56
SUMO1-203ENST00000392246 CNNM1Q9NRU3 951 aa18.58■□□□□ 0.56
SUMO1-203ENST00000392246 MINPP1Q9UNW1 487 aa18.58■□□□□ 0.56
SUMO1-203ENST00000392246 AAMPQ13685 434 aa18.57■□□□□ 0.56
SUMO1-203ENST00000392246 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
SUMO1-203ENST00000392246 MPNDQ8N594 471 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms