RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
ERCC2-204ENST00000391945 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
ERCC2-204ENST00000391945 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
ERCC2-204ENST00000391945 GRPEL1Q9HAV7 217 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 IGKV5-2P06315 115 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 CCDC129Q6ZRS4 1044 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 SH3TC1Q8TE82 1336 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
ERCC2-204ENST00000391945 RAB11FIP4Q86YS3 637 aa15.19■□□□□ 0.02
ERCC2-204ENST00000391945 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
ERCC2-204ENST00000391945 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
ERCC2-204ENST00000391945 CCNL1Q9UK58 526 aaPredicted RBP15.18■□□□□ 0.02
ERCC2-204ENST00000391945 USP32Q8NFA0 1604 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 DHX16O60231 1041 aaKnown RBP15.18■□□□□ 0.02
ERCC2-204ENST00000391945 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
ERCC2-204ENST00000391945 SNX21Q969T3 373 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 NAPBQ9H115 298 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 NLRP3Q96P20 1036 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 ARID3AQ99856 593 aa15.18■□□□□ 0.02
ERCC2-204ENST00000391945 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 SIK1P57059 783 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 LRRC24Q50LG9 513 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 SLC9C2Q5TAH2 1124 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 ANKRD18AQ8IVF6 992 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 TLR7Q9NYK1 1049 aaKnown RBP15.17■□□□□ 0.02
ERCC2-204ENST00000391945 ZNF213O14771 459 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 NRKQ7Z2Y5 1582 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 SGSM2O43147 1006 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 TAF5LO75529 589 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 EPHA10Q5JZY3 1008 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 RASSF8Q8NHQ8 419 aa15.17■□□□□ 0.02
ERCC2-204ENST00000391945 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
ERCC2-204ENST00000391945 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
ERCC2-204ENST00000391945 MPNDQ8N594 471 aa15.16■□□□□ 0.02
ERCC2-204ENST00000391945 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
ERCC2-204ENST00000391945 CCDC82Q8N4S0 544 aa15.16■□□□□ 0.02
ERCC2-204ENST00000391945 RPGRQ92834 1020 aaKnown RBP15.16■□□□□ 0.02
ERCC2-204ENST00000391945 PUS3Q9BZE2 481 aaKnown RBP15.16■□□□□ 0.02
ERCC2-204ENST00000391945 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.16■□□□□ 0.02
ERCC2-204ENST00000391945 ANAPC15P60006 121 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 CHST3Q7LGC8 479 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 BRF1Q92994 677 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
ERCC2-204ENST00000391945 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
ERCC2-204ENST00000391945 JAG2Q9Y219 1238 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 NCAPD2Q15021 1401 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 PDE8AO60658 829 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 AK2P54819 239 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 MST1RQ04912 1400 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 MBD3O95983 291 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 SF3B2Q13435 895 aaKnown RBP15.14■□□□□ 0.01
ERCC2-204ENST00000391945 SAFBQ15424 915 aaKnown RBP eCLIP15.14■□□□□ 0.01
ERCC2-204ENST00000391945 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
ERCC2-204ENST00000391945 ADCY9O60503 1353 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 GJB2P29033 226 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 CCDC69A6NI79 296 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 NBPF26B4DH59 902 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 NBPF14Q5TI25 921 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 NBPF10Q6P3W6 841 aaKnown RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 NBPF15Q8N660 670 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 GIGYF2Q6Y7W6 1299 aaKnown RBP15.13■□□□□ 0.01
ERCC2-204ENST00000391945 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 UBAC1Q9BSL1 405 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 MAP3K15Q6ZN16 1313 aa15.13■□□□□ 0.01
ERCC2-204ENST00000391945 SASH1O94885 1247 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 TTF1Q15361 905 aaPredicted RBP15.12■□□□□ 0.01
ERCC2-204ENST00000391945 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 COPRSQ9NQ92 184 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 KRT85P78386 507 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
ERCC2-204ENST00000391945 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
ERCC2-204ENST00000391945 AOX1Q06278 1338 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 CEMIPQ8WUJ3 1361 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
ERCC2-204ENST00000391945 SEC62Q99442 399 aaKnown RBP15.12■□□□□ 0.01
ERCC2-204ENST00000391945 GREM2Q9H772 168 aa15.12■□□□□ 0.01
ERCC2-204ENST00000391945 POLA2Q14181 598 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms