RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 TOMM70O94826 608 aa18.09■□□□□ 0.49
IGHV3-48-201ENST00000390624 IARSP41252 1262 aaKnown RBP18.09■□□□□ 0.49
IGHV3-48-201ENST00000390624 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
IGHV3-48-201ENST00000390624 TMC4Q7Z404 712 aa18.09■□□□□ 0.49
IGHV3-48-201ENST00000390624 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
IGHV3-48-201ENST00000390624 NEURL1BA8MQ27 555 aa18.08■□□□□ 0.48
IGHV3-48-201ENST00000390624 PDE8AO60658 829 aa18.08■□□□□ 0.48
IGHV3-48-201ENST00000390624 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
IGHV3-48-201ENST00000390624 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
IGHV3-48-201ENST00000390624 JARID2Q92833 1246 aaPredicted RBP18.08■□□□□ 0.48
IGHV3-48-201ENST00000390624 TAF1P21675 1872 aa18.07■□□□□ 0.48
IGHV3-48-201ENST00000390624 VEGFAP15692 232 aaPredicted RBP18.07■□□□□ 0.48
IGHV3-48-201ENST00000390624 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 VPS33BQ9H267 617 aa18.06■□□□□ 0.48
IGHV3-48-201ENST00000390624 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 GCKRQ14397 625 aa18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 DPP8Q6V1X1 898 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 SLC51AQ86UW1 340 aa18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 MPNDQ8N594 471 aa18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 SUPT20HQ8NEM7 779 aa18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
IGHV3-48-201ENST00000390624 H7C1W4 665 aa18.04■□□□□ 0.48
IGHV3-48-201ENST00000390624 FZD9O00144 591 aa18.04■□□□□ 0.48
IGHV3-48-201ENST00000390624 DDNO94850 711 aaPredicted RBP18.04■□□□□ 0.48
IGHV3-48-201ENST00000390624 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
IGHV3-48-201ENST00000390624 RTFDC1Q9BY42 306 aaPredicted RBP18.04■□□□□ 0.48
IGHV3-48-201ENST00000390624 F6X3S4 739 aa18.03■□□□□ 0.48
IGHV3-48-201ENST00000390624 LARGE2Q8N3Y3 721 aa18.03■□□□□ 0.48
IGHV3-48-201ENST00000390624 RBM46Q8TBY0 533 aaKnown RBP18.03■□□□□ 0.48
IGHV3-48-201ENST00000390624 POTECB2RU33 542 aa18.02■□□□□ 0.48
IGHV3-48-201ENST00000390624 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
IGHV3-48-201ENST00000390624 WDR90Q96KV7 1748 aa18.02■□□□□ 0.48
IGHV3-48-201ENST00000390624 SEC31BQ9NQW1 1179 aa18.02■□□□□ 0.48
IGHV3-48-201ENST00000390624 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 CTSWP56202 376 aa18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 MRPL50Q8N5N7 158 aaKnown RBP18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 TTLL11Q8NHH1 800 aa18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
IGHV3-48-201ENST00000390624 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
IGHV3-48-201ENST00000390624 AOC3Q16853 763 aa18■□□□□ 0.47
IGHV3-48-201ENST00000390624 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
IGHV3-48-201ENST00000390624 MYH3P11055 1940 aa18■□□□□ 0.47
IGHV3-48-201ENST00000390624 ZNF541Q9H0D2 1346 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 LRRC37AA6NMS7 1700 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 CASP7P55210 303 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 FSTL1Q12841 308 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 SLC4A10Q6U841 1118 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 GPC2Q8N158 579 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 L3MBTL3Q96JM7 780 aaPredicted RBP17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
IGHV3-48-201ENST00000390624 IQCA1LA6NCM1 817 aa17.98■□□□□ 0.47
IGHV3-48-201ENST00000390624 HSPA6P17066 643 aa17.98■□□□□ 0.47
IGHV3-48-201ENST00000390624 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
IGHV3-48-201ENST00000390624 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
IGHV3-48-201ENST00000390624 PTPRCP08575 1304 aa17.98■□□□□ 0.47
IGHV3-48-201ENST00000390624 COL4A1P02462 1669 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 COL4A5P29400 1685 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 GPSM2P81274 684 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 SRCIN1Q9C0H9 1055 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 GREM2Q9H772 168 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 ZNRF3Q9ULT6 936 aa17.97■□□□□ 0.47
IGHV3-48-201ENST00000390624 SCN4AP35499 1836 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 C6orf229H3BNL8 230 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 CSF1RP07333 972 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 WASHC4Q2M389 1173 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 GJA3Q9Y6H8 435 aa17.96■□□□□ 0.47
IGHV3-48-201ENST00000390624 GRM8O00222 908 aa17.95■□□□□ 0.46
IGHV3-48-201ENST00000390624 EYA3Q99504 573 aa17.95■□□□□ 0.46
IGHV3-48-201ENST00000390624 C9orf78Q9NZ63 289 aaPredicted RBP17.95■□□□□ 0.46
IGHV3-48-201ENST00000390624 ANKIB1Q9P2G1 1089 aa17.95■□□□□ 0.46
IGHV3-48-201ENST00000390624 HACL1Q9UJ83 578 aa17.95■□□□□ 0.46
IGHV3-48-201ENST00000390624 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
IGHV3-48-201ENST00000390624 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
IGHV3-48-201ENST00000390624 TAF1DQ9H5J8 278 aaPredicted RBP17.94■□□□□ 0.46
IGHV3-48-201ENST00000390624 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
IGHV3-48-201ENST00000390624 BSDC1Q9NW68 430 aaPredicted RBP17.94■□□□□ 0.46
IGHV3-48-201ENST00000390624 DUOX1Q9NRD9 1551 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 ITGA6P23229 1130 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 FOXO4P98177 505 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 CXCL9Q07325 125 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 GGA1Q9UJY5 639 aa17.93■□□□□ 0.46
IGHV3-48-201ENST00000390624 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
IGHV3-48-201ENST00000390624 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms