RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
TRAV38-1-201ENST00000390464 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
TRAV38-1-201ENST00000390464 ZNF541Q9H0D2 1346 aa9.24□□□□□ -0.93
TRAV38-1-201ENST00000390464 APAF1O14727 1248 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 ANP32CO43423 234 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 PDIA6Q15084 440 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 DPP8Q6V1X1 898 aaPredicted RBP9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 ABCC4O15439 1325 aa9.23□□□□□ -0.93
TRAV38-1-201ENST00000390464 ADAMTSL1Q8N6G6 1762 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 BBOX1O75936 387 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 EPHX2P34913 555 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 HTRA3P83110 453 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 KRT24Q2M2I5 525 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 VPS33BQ9H267 617 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 ATP6V0A2Q9Y487 856 aa9.22□□□□□ -0.93
TRAV38-1-201ENST00000390464 PSME4Q14997 1843 aa9.21□□□□□ -0.93
TRAV38-1-201ENST00000390464 FZD9O00144 591 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 GRAPQ13588 217 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 SLC10A5Q5PT55 438 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 MPNDQ8N594 471 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 POLR2AP24928 1970 aaKnown RBP9.21□□□□□ -0.94
TRAV38-1-201ENST00000390464 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 G3V3G9 751 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 ELL2O00472 640 aaPredicted RBP9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 NEXNQ0ZGT2 675 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 AOC3Q16853 763 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
TRAV38-1-201ENST00000390464 POTECB2RU33 542 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 TNIP1Q15025 636 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 SP8Q8IXZ3 490 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 FAM89AQ96GI7 184 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 EYA3Q99504 573 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 MYD88Q99836 296 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 ZNRF3Q9ULT6 936 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
TRAV38-1-201ENST00000390464 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 C6orf229H3BNL8 230 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 IRS4O14654 1257 aaPredicted RBP9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 COL4A5P29400 1685 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 IFFO2Q5TF58 517 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 JMYQ8N9B5 988 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
TRAV38-1-201ENST00000390464 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 CIAPIN1Q6FI81 312 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 CNTROBQ8N137 903 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 ZBTB38Q8NAP3 1195 aaPredicted RBP9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 CCDC191Q8NCU4 936 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 ISCA1Q9BUE6 129 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 ADARB2Q9NS39 739 aaKnown RBP9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 AKAP11Q9UKA4 1901 aa9.17□□□□□ -0.94
TRAV38-1-201ENST00000390464 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 H7C1D1 291 aa9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 HSPA1AP0DMV8 641 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 HSPA1BP0DMV9 641 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 SF3B3Q15393 1217 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 WASHC4Q2M389 1173 aa9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 TWISTNBQ3B726 338 aaPredicted RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 MAP1SQ66K74 1059 aaPredicted RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 TSR2Q969E8 191 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 RTFDC1Q9BY42 306 aaPredicted RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 PHAXQ9H814 394 aaKnown RBP9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 ANKIB1Q9P2G1 1089 aa9.16□□□□□ -0.94
TRAV38-1-201ENST00000390464 SCN9AQ15858 1988 aa9.15□□□□□ -0.94
TRAV38-1-201ENST00000390464 CNTNAP1P78357 1384 aa9.15□□□□□ -0.94
TRAV38-1-201ENST00000390464 IL16Q14005 1332 aa9.15□□□□□ -0.94
TRAV38-1-201ENST00000390464 PASKQ96RG2 1323 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms