RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 LRRC37AA6NMS7 1700 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 TAF1P21675 1872 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 NEURL1BA8MQ27 555 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 TOMM70O94826 608 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
TRBV27-201ENST00000390399 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
TRBV27-201ENST00000390399 COL4A1P02462 1669 aa11.43□□□□□ -0.58
TRBV27-201ENST00000390399 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 PDE8AO60658 829 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 VEGFAP15692 232 aaPredicted RBP11.42□□□□□ -0.58
TRBV27-201ENST00000390399 DPP8Q6V1X1 898 aaPredicted RBP11.42□□□□□ -0.58
TRBV27-201ENST00000390399 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 DNAAF4Q8WXU2 420 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 CELF1Q92879 486 aaKnown RBP11.42□□□□□ -0.58
TRBV27-201ENST00000390399 COL4A5P29400 1685 aa11.42□□□□□ -0.58
TRBV27-201ENST00000390399 PPIP5K2O43314 1243 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
TRBV27-201ENST00000390399 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 MIER1Q8N108 512 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 MPNDQ8N594 471 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
TRBV27-201ENST00000390399 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
TRBV27-201ENST00000390399 FZD9O00144 591 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 CTSWP56202 376 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 GCKRQ14397 625 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 AOC3Q16853 763 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 UBE3BQ7Z3V4 1068 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
TRBV27-201ENST00000390399 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
TRBV27-201ENST00000390399 RTFDC1Q9BY42 306 aaPredicted RBP11.4□□□□□ -0.58
TRBV27-201ENST00000390399 MYH3P11055 1940 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 POTECB2RU33 542 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 F6X3S4 739 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 H7C1W4 665 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 HSPA6P17066 643 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
TRBV27-201ENST00000390399 RPS8P62241 208 aaKnown RBP11.39□□□□□ -0.59
TRBV27-201ENST00000390399 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
TRBV27-201ENST00000390399 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
TRBV27-201ENST00000390399 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 IQCA1LA6NCM1 817 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 FSTL1Q12841 308 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 ANKRD18AQ8IVF6 992 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
TRBV27-201ENST00000390399 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
TRBV27-201ENST00000390399 SCN4AP35499 1836 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 CASP7P55210 303 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 GPSM2P81274 684 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 KIAA2012Q0VF49 1180 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 GPC2Q8N158 579 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
TRBV27-201ENST00000390399 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
TRBV27-201ENST00000390399 GJA3Q9Y6H8 435 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
TRBV27-201ENST00000390399 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
TRBV27-201ENST00000390399 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
TRBV27-201ENST00000390399 GREM2Q9H772 168 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 HACL1Q9UJ83 578 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
TRBV27-201ENST00000390399 PTPRCP08575 1304 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 ALDH1L2Q3SY69 923 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 EYA3Q99504 573 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 SRCIN1Q9C0H9 1055 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
TRBV27-201ENST00000390399 GRM8O00222 908 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 ALDH1L1O75891 902 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 UFL1O94874 794 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
TRBV27-201ENST00000390399 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
TRBV27-201ENST00000390399 EPHX2P34913 555 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 APLP1P51693 650 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
TRBV27-201ENST00000390399 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
TRBV27-201ENST00000390399 CSF1RP07333 972 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms