RNA–Protein interactions for RNA: ENST00000384040.1

RNU6-949P-201, Transcript of RNA, U6 small nuclear 949, pseudogene, humanhuman

BASIC

Gene RNU6-949P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-949P-201ENST00000384040 IER5Q5VY09 327 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 MCTP1Q6DN14 999 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 GDF6Q6KF10 455 aaPredicted RBP2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 ELMSAN1Q6PJG2 1045 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 IGF2-ASQ6U949 168 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 AGGF1Q8N302 714 aaeCLIP2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 STAG2Q8N3U4 1231 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 DTWD1Q8N5C7 304 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 IFT43Q96FT9 208 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 SMG9Q9H0W8 520 aaKnown RBP2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 EFCC1Q9HA90 598 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 GOLGA2P5Q9HBQ8 144 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 FRRS1LQ9P0K9 344 aa2.33□□□□□ -2.04
RNU6-949P-201ENST00000384040 J3QW42 95 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 DLL1O00548 723 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 RAD21O60216 631 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 EPB42P16452 691 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 FSTP19883 344 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 SEC13P55735 322 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 GPLD1P80108 840 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 PCSK7Q16549 785 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 CRTC2Q53ET0 693 aaPredicted RBP2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 DZIP1LQ8IYY4 767 aaKnown RBP2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 TRPM4Q8TD43 1214 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 AKTIPQ9H8T0 292 aa2.32□□□□□ -2.04
RNU6-949P-201ENST00000384040 KRTAP4-8A0A0G2JLE6 195 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 SLC24A1O60721 1099 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 MICAL2O94851 1124 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 MAP3K6O95382 1288 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 MED26O95402 600 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 TGFB1P01137 390 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 UBTFP17480 764 aaKnown RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 CD97P48960 835 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 ARSDP51689 593 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 DPYDQ12882 1025 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 IL22RA1Q8N6P7 574 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 GLMNQ92990 594 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 PLD4Q96BZ4 506 aa2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 NSUN5Q96P11 429 aaKnown RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 MRPL18Q9H0U6 180 aaKnown RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 QTRT2Q9H974 415 aaKnown RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 TFIP11Q9UBB9 837 aaKnown RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 COL17A1Q9UMD9 1497 aaPredicted RBP2.31□□□□□ -2.04
RNU6-949P-201ENST00000384040 LOC102724428A0A0B4J2F2 783 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L15C9J2P7 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L10C9JJH3 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L13C9JLJ4 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L12C9JPN9 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L11C9JVI0 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L21D6R901 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L18D6R9N7 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L22D6RA61 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L17D6RBQ6 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L19D6RCP7 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L20D6RJB6 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 F8W735 103 aaPredicted RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 OPLAHO14841 1288 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 PAX4O43316 350 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 MMP20O60882 483 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 XYLBO75191 536 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 GHRHP01286 108 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 GLB1P16278 677 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 IGFBP4P22692 258 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 SIK1P57059 783 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 USP17L24Q0WX57 530 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 PTK7Q13308 1070 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 SETDB1Q15047 1291 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 TXNDC11Q6PKC3 985 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 LARP1Q6PKG0 1096 aaKnown RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 RGL4Q8IZJ4 473 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 CMTR1Q8N1G2 835 aaKnown RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 TMEM130Q8N3G9 435 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 TTC9Q92623 222 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 UBL7Q96S82 380 aaPredicted RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 TLR7Q9NYK1 1049 aaKnown RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 LRFN2Q9ULH4 789 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 TRIM33Q9UPN9 1127 aa2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 RTCBQ9Y3I0 505 aaKnown RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 MAFBQ9Y5Q3 323 aaPredicted RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 OAS3Q9Y6K5 1087 aaKnown RBP2.3□□□□□ -2.04
RNU6-949P-201ENST00000384040 PTCD1O75127 700 aaKnown RBP2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 ADAMTS4O75173 837 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 WISP1O95388 367 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 IGLV1-40P01703 118 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 PSAPP07602 524 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 TAL1P17542 331 aaPredicted RBP2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 ARID4AP29374 1257 aaPredicted RBP2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 IRAK1P51617 712 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 NRLP54845 237 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 GP2P55259 537 aaKnown RBP2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 C11orf91Q3C1V1 193 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 Q6ZS46 218 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 ANKMY2Q8IV38 441 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 GALNT11Q8NCW6 608 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 CLUAP1Q96AJ1 413 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 RAXQ9Y2V3 346 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 KCNMB2Q9Y691 235 aa2.29□□□□□ -2.04
RNU6-949P-201ENST00000384040 FAM196BA6NMK8 535 aa2.28□□□□□ -2.04
RNU6-949P-201ENST00000384040 LINC01387J3KSC0 135 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms