RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 C3orf67Q6ZVT6 689 aa22.2■■□□□ 1.14
CD9-202ENST00000382515 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
CD9-202ENST00000382515 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
CD9-202ENST00000382515 GRAPQ13588 217 aa22.19■■□□□ 1.14
CD9-202ENST00000382515 TMEM57Q8N5G2 664 aa22.19■■□□□ 1.14
CD9-202ENST00000382515 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
CD9-202ENST00000382515 RTL9Q8NET4 1388 aa22.19■■□□□ 1.14
CD9-202ENST00000382515 FOXO4P98177 505 aa22.18■■□□□ 1.14
CD9-202ENST00000382515 PRPF40BQ6NWY9 871 aaKnown RBP22.18■■□□□ 1.14
CD9-202ENST00000382515 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
CD9-202ENST00000382515 RPS8P62241 208 aaKnown RBP22.17■■□□□ 1.14
CD9-202ENST00000382515 RABL6Q3YEC7 729 aaPredicted RBP22.16■■□□□ 1.14
CD9-202ENST00000382515 C7orf43Q8WVR3 580 aa22.16■■□□□ 1.14
CD9-202ENST00000382515 DDX19BQ9UMR2 479 aa22.16■■□□□ 1.14
CD9-202ENST00000382515 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
CD9-202ENST00000382515 IFIT5Q13325 482 aaKnown RBP22.15■■□□□ 1.14
CD9-202ENST00000382515 LMBR1LQ6UX01 489 aa22.15■■□□□ 1.14
CD9-202ENST00000382515 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
CD9-202ENST00000382515 SP8Q8IXZ3 490 aa22.15■■□□□ 1.14
CD9-202ENST00000382515 RTKN2Q8IZC4 609 aa22.15■■□□□ 1.14
CD9-202ENST00000382515 PELP1Q8IZL8 1130 aaKnown RBP22.15■■□□□ 1.14
CD9-202ENST00000382515 SUCLG2Q96I99 432 aa22.15■■□□□ 1.14
CD9-202ENST00000382515 ANKRD18BA2A2Z9 1011 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 PLIN1O60240 522 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 GNAI2P04899 355 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 RLBP1P12271 317 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 CCDC57Q2TAC2 916 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 KAZALD1Q96I82 304 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 TNNQ9UQP3 1299 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
CD9-202ENST00000382515 PPEF1O14829 653 aaPredicted RBP22.13■■□□□ 1.13
CD9-202ENST00000382515 YBX3P16989 372 aaKnown RBP eCLIP22.13■■□□□ 1.13
CD9-202ENST00000382515 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
CD9-202ENST00000382515 MVPQ14764 893 aaKnown RBP22.13■■□□□ 1.13
CD9-202ENST00000382515 ANKRD18AQ8IVF6 992 aa22.13■■□□□ 1.13
CD9-202ENST00000382515 PANK1Q8TE04 598 aa22.13■■□□□ 1.13
CD9-202ENST00000382515 MEIS3Q99687 375 aa22.13■■□□□ 1.13
CD9-202ENST00000382515 GREM2Q9H772 168 aa22.13■■□□□ 1.13
CD9-202ENST00000382515 C21orf2O43822 256 aa22.12■■□□□ 1.13
CD9-202ENST00000382515 ITGA6P23229 1130 aa22.12■■□□□ 1.13
CD9-202ENST00000382515 CCDC93Q567U6 631 aa22.12■■□□□ 1.13
CD9-202ENST00000382515 BICC1Q9H694 974 aaKnown RBP22.12■■□□□ 1.13
CD9-202ENST00000382515 BSDC1Q9NW68 430 aaPredicted RBP22.12■■□□□ 1.13
CD9-202ENST00000382515 IGHMBP2P38935 993 aaKnown RBP22.11■■□□□ 1.13
CD9-202ENST00000382515 EPHA10Q5JZY3 1008 aa22.11■■□□□ 1.13
CD9-202ENST00000382515 ARHGAP27Q6ZUM4 889 aa22.1■■□□□ 1.13
CD9-202ENST00000382515 CELF1Q92879 486 aaKnown RBP22.1■■□□□ 1.13
CD9-202ENST00000382515 SEC31BQ9NQW1 1179 aa22.1■■□□□ 1.13
CD9-202ENST00000382515 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
CD9-202ENST00000382515 ANKRD31Q8N7Z5 1873 aa22.09■■□□□ 1.13
CD9-202ENST00000382515 MTX1Q13505 466 aa22.09■■□□□ 1.13
CD9-202ENST00000382515 MPHOSPH8Q99549 860 aa22.09■■□□□ 1.13
CD9-202ENST00000382515 VPS33BQ9H267 617 aa22.09■■□□□ 1.13
CD9-202ENST00000382515 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
CD9-202ENST00000382515 FAM161AQ3B820 660 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 ANKRD44Q8N8A2 993 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 CCDC85AQ96PX6 553 aaPredicted RBP22.08■■□□□ 1.13
CD9-202ENST00000382515 FBXO3Q9UK99 471 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 WWC3Q9ULE0 1092 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 COG6Q9Y2V7 657 aa22.08■■□□□ 1.13
CD9-202ENST00000382515 LRRFIP2Q9Y608 721 aaKnown RBP22.08■■□□□ 1.13
CD9-202ENST00000382515 LTBP3Q9NS15 1303 aa22.07■■□□□ 1.12
CD9-202ENST00000382515 SUPT20HQ8NEM7 779 aa22.07■■□□□ 1.12
CD9-202ENST00000382515 PSMD1Q99460 953 aa22.07■■□□□ 1.12
CD9-202ENST00000382515 KIAA1551Q9HCM1 1747 aa22.06■■□□□ 1.12
CD9-202ENST00000382515 AAMPQ13685 434 aa22.06■■□□□ 1.12
CD9-202ENST00000382515 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
CD9-202ENST00000382515 LDHAL6AQ6ZMR3 332 aa22.05■■□□□ 1.12
CD9-202ENST00000382515 MPNDQ8N594 471 aa22.05■■□□□ 1.12
CD9-202ENST00000382515 ANKRD2Q9GZV1 360 aa22.05■■□□□ 1.12
CD9-202ENST00000382515 PODXL2Q9NZ53 605 aa22.05■■□□□ 1.12
CD9-202ENST00000382515 FKBP4Q02790 459 aaKnown RBP eCLIP22.04■■□□□ 1.12
CD9-202ENST00000382515 RTFDC1Q9BY42 306 aaPredicted RBP22.04■■□□□ 1.12
CD9-202ENST00000382515 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
CD9-202ENST00000382515 ZNF219Q9P2Y4 722 aaPredicted RBP22.04■■□□□ 1.12
CD9-202ENST00000382515 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
CD9-202ENST00000382515 ATP8B2P98198 1209 aa22.03■■□□□ 1.12
CD9-202ENST00000382515 C20orf194Q5TEA3 1177 aa22.03■■□□□ 1.12
CD9-202ENST00000382515 DPP8Q6V1X1 898 aaPredicted RBP22.03■■□□□ 1.12
CD9-202ENST00000382515 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
CD9-202ENST00000382515 MINPP1Q9UNW1 487 aa22.03■■□□□ 1.12
CD9-202ENST00000382515 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
CD9-202ENST00000382515 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
CD9-202ENST00000382515 LMNB1P20700 586 aa22.02■■□□□ 1.12
CD9-202ENST00000382515 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
CD9-202ENST00000382515 DDX60Q8IY21 1712 aaKnown RBP22.02■■□□□ 1.12
CD9-202ENST00000382515 UTRNP46939 3433 aa22.02■■□□□ 1.11
CD9-202ENST00000382515 SRGAP3O43295 1099 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 COPRSQ9NQ92 184 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 CNNM1Q9NRU3 951 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 ANKIB1Q9P2G1 1089 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 LEMD3Q9Y2U8 911 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 DLEC1Q9Y238 1755 aa22.01■■□□□ 1.11
CD9-202ENST00000382515 NFKBIEO00221 500 aa22■■□□□ 1.11
CD9-202ENST00000382515 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
CD9-202ENST00000382515 ATP2B4P23634 1241 aa22■■□□□ 1.11
CD9-202ENST00000382515 RFX5P48382 616 aaPredicted RBP22■■□□□ 1.11
CD9-202ENST00000382515 PTPN12Q05209 780 aaKnown RBP22■■□□□ 1.11
CD9-202ENST00000382515 XDHP47989 1333 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms