RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 KIAA2012Q0VF49 1180 aa29.64■■■□□ 2.34
VLDLR-201ENST00000382096 RUNDC1Q96C34 613 aa29.64■■■□□ 2.34
VLDLR-201ENST00000382096 ABHD8Q96I13 439 aa29.64■■■□□ 2.34
VLDLR-201ENST00000382096 GPR101Q96P66 508 aaPredicted RBP29.64■■■□□ 2.34
VLDLR-201ENST00000382096 GMPSP49915 693 aaPredicted RBP29.63■■■□□ 2.33
VLDLR-201ENST00000382096 COPS6Q7L5N1 327 aa29.63■■■□□ 2.33
VLDLR-201ENST00000382096 CCDC146Q8IYE0 955 aa29.63■■■□□ 2.33
VLDLR-201ENST00000382096 MPNDQ8N594 471 aa29.63■■■□□ 2.33
VLDLR-201ENST00000382096 PGAP2Q9UHJ9 254 aa29.63■■■□□ 2.33
VLDLR-201ENST00000382096 HCLS1P14317 486 aaPredicted RBP29.62■■■□□ 2.33
VLDLR-201ENST00000382096 BEGAINQ9BUH8 593 aa29.62■■■□□ 2.33
VLDLR-201ENST00000382096 CHL1O00533 1208 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 TCIRG1Q13488 830 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 WDR43Q15061 677 aaKnown RBP eCLIP29.61■■■□□ 2.33
VLDLR-201ENST00000382096 CIAPIN1Q6FI81 312 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 XAGE3Q8WTP9 111 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 PRKRIP1Q9H875 184 aaPredicted RBP29.61■■■□□ 2.33
VLDLR-201ENST00000382096 TRIM35Q9UPQ4 493 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 SH3TC1Q8TE82 1336 aa29.61■■■□□ 2.33
VLDLR-201ENST00000382096 MAP2K2P36507 400 aa29.6■■■□□ 2.33
VLDLR-201ENST00000382096 GRM1Q13255 1194 aa29.6■■■□□ 2.33
VLDLR-201ENST00000382096 GRAPQ13588 217 aa29.6■■■□□ 2.33
VLDLR-201ENST00000382096 DDX46Q7L014 1031 aaKnown RBP29.6■■■□□ 2.33
VLDLR-201ENST00000382096 SAPCD2Q86UD0 394 aa29.6■■■□□ 2.33
VLDLR-201ENST00000382096 GRAPLQ8TC17 118 aaPredicted RBP29.6■■■□□ 2.33
VLDLR-201ENST00000382096 ADAMTS8Q9UP79 889 aa29.6■■■□□ 2.33
VLDLR-201ENST00000382096 AIMP1Q12904 312 aaKnown RBP29.59■■■□□ 2.33
VLDLR-201ENST00000382096 TNIP1Q15025 636 aa29.59■■■□□ 2.33
VLDLR-201ENST00000382096 ZC3H15Q8WU90 426 aaKnown RBP29.59■■■□□ 2.33
VLDLR-201ENST00000382096 TRMT112Q9UI30 125 aaKnown RBP29.59■■■□□ 2.33
VLDLR-201ENST00000382096 CELF2O95319 508 aaKnown RBP29.58■■■□□ 2.33
VLDLR-201ENST00000382096 TMC4Q7Z404 712 aa29.58■■■□□ 2.33
VLDLR-201ENST00000382096 NECTIN2Q92692 538 aa29.58■■■□□ 2.33
VLDLR-201ENST00000382096 HHIPL1Q96JK4 782 aa29.58■■■□□ 2.33
VLDLR-201ENST00000382096 GLIS2Q9BZE0 524 aaPredicted RBP29.58■■■□□ 2.33
VLDLR-201ENST00000382096 NEUROD2Q15784 382 aa29.57■■■□□ 2.32
VLDLR-201ENST00000382096 AOC2O75106 756 aa29.56■■■□□ 2.32
VLDLR-201ENST00000382096 RAD17O75943 681 aa29.56■■■□□ 2.32
VLDLR-201ENST00000382096 BCL2L13Q9BXK5 485 aa29.56■■■□□ 2.32
VLDLR-201ENST00000382096 YDJCA8MPS7 323 aa29.55■■■□□ 2.32
VLDLR-201ENST00000382096 HIRAP54198 1017 aaPredicted RBP29.55■■■□□ 2.32
VLDLR-201ENST00000382096 POLR2AP24928 1970 aaKnown RBP29.54■■■□□ 2.32
VLDLR-201ENST00000382096 TRPM4Q8TD43 1214 aa29.53■■■□□ 2.32
VLDLR-201ENST00000382096 CASP8AP2Q9UKL3 1982 aa29.53■■■□□ 2.32
VLDLR-201ENST00000382096 KRT24Q2M2I5 525 aa29.52■■■□□ 2.32
VLDLR-201ENST00000382096 CDC37L1Q7L3B6 337 aa29.52■■■□□ 2.32
VLDLR-201ENST00000382096 CHPF2Q9P2E5 772 aa29.52■■■□□ 2.32
VLDLR-201ENST00000382096 CNOT7Q9UIV1 285 aaKnown RBP29.52■■■□□ 2.32
VLDLR-201ENST00000382096 COL4A1P02462 1669 aa29.52■■■□□ 2.32
VLDLR-201ENST00000382096 CA12O43570 354 aa29.51■■■□□ 2.31
VLDLR-201ENST00000382096 HOXB7P09629 217 aa29.5■■■□□ 2.31
VLDLR-201ENST00000382096 BRPF1P55201 1214 aaPredicted RBP29.5■■■□□ 2.31
VLDLR-201ENST00000382096 PLBD2Q8NHP8 589 aa29.5■■■□□ 2.31
VLDLR-201ENST00000382096 TSKSQ9UJT2 592 aa29.5■■■□□ 2.31
VLDLR-201ENST00000382096 SHTN1A0MZ66 631 aa29.49■■■□□ 2.31
VLDLR-201ENST00000382096 H7C1D1 291 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 MICALL2Q8IY33 904 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 DPF2Q92785 391 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 CFAP44Q96MT7 982 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 ISCA1Q9BUE6 129 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 ZNF408Q9H9D4 720 aa29.48■■■□□ 2.31
VLDLR-201ENST00000382096 SF3B3Q15393 1217 aaKnown RBP29.47■■■□□ 2.31
VLDLR-201ENST00000382096 WASHC4Q2M389 1173 aa29.47■■■□□ 2.31
VLDLR-201ENST00000382096 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
VLDLR-201ENST00000382096 SCN9AQ15858 1988 aa29.46■■■□□ 2.31
VLDLR-201ENST00000382096 FAM161AQ3B820 660 aa29.46■■■□□ 2.31
VLDLR-201ENST00000382096 HDGFL1Q5TGJ6 251 aa29.46■■■□□ 2.31
VLDLR-201ENST00000382096 ANKRD13DQ6ZTN6 518 aa29.46■■■□□ 2.31
VLDLR-201ENST00000382096 CELF1Q92879 486 aaKnown RBP29.46■■■□□ 2.31
VLDLR-201ENST00000382096 PSMD14O00487 310 aa29.45■■■□□ 2.31
VLDLR-201ENST00000382096 ZNF428Q96B54 188 aa29.45■■■□□ 2.31
VLDLR-201ENST00000382096 FAM89AQ96GI7 184 aa29.45■■■□□ 2.31
VLDLR-201ENST00000382096 DBF4Q9UBU7 674 aaPredicted RBP29.45■■■□□ 2.31
VLDLR-201ENST00000382096 NSFL1CQ9UNZ2 370 aaKnown RBP29.45■■■□□ 2.31
VLDLR-201ENST00000382096 ZBTB12Q9Y330 459 aaPredicted RBP29.45■■■□□ 2.31
VLDLR-201ENST00000382096 PSME4Q14997 1843 aa29.43■■■□□ 2.3
VLDLR-201ENST00000382096 CCDC85CA6NKD9 419 aa29.43■■■□□ 2.3
VLDLR-201ENST00000382096 ZNF853P0CG23 659 aa29.43■■■□□ 2.3
VLDLR-201ENST00000382096 DBNDD1Q9H9R9 158 aa29.43■■■□□ 2.3
VLDLR-201ENST00000382096 NOGQ13253 232 aa29.42■■■□□ 2.3
VLDLR-201ENST00000382096 SAMD7Q7Z3H4 446 aa29.42■■■□□ 2.3
VLDLR-201ENST00000382096 USP48Q86UV5 1035 aa29.42■■■□□ 2.3
VLDLR-201ENST00000382096 POLLQ9UGP5 575 aa29.42■■■□□ 2.3
VLDLR-201ENST00000382096 ATP5J2-PTCD1G3V325 749 aa29.41■■■□□ 2.3
VLDLR-201ENST00000382096 RPS12P25398 132 aaKnown RBP29.41■■■□□ 2.3
VLDLR-201ENST00000382096 RGS19P49795 217 aa29.41■■■□□ 2.3
VLDLR-201ENST00000382096 GPSM2P81274 684 aa29.41■■■□□ 2.3
VLDLR-201ENST00000382096 MBIPQ9NS73 344 aa29.41■■■□□ 2.3
VLDLR-201ENST00000382096 APAF1O14727 1248 aa29.4■■■□□ 2.3
VLDLR-201ENST00000382096 HUNKP57058 714 aa29.4■■■□□ 2.3
VLDLR-201ENST00000382096 TRIM28Q13263 835 aaKnown RBP29.4■■■□□ 2.3
VLDLR-201ENST00000382096 HYPKQ9NX55 129 aa29.4■■■□□ 2.3
VLDLR-201ENST00000382096 RTL9Q8NET4 1388 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 C6orf229H3BNL8 230 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 RIMBP2O15034 1052 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 ECE2O60344 883 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 EGFRP00533 1210 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 EYA3Q99504 573 aa29.39■■■□□ 2.3
VLDLR-201ENST00000382096 AKAP11Q9UKA4 1901 aa29.38■■■□□ 2.29
VLDLR-201ENST00000382096 TBC1D10BQ4KMP7 808 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms