RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 NTSR2O95665 410 aa15.26■□□□□ 0.03
CIITA-202ENST00000381835 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CIITA-202ENST00000381835 RFX5P48382 616 aaPredicted RBP15.26■□□□□ 0.03
CIITA-202ENST00000381835 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
CIITA-202ENST00000381835 KIF1BPQ96EK5 621 aa15.26■□□□□ 0.03
CIITA-202ENST00000381835 RGL2O15211 777 aa15.25■□□□□ 0.03
CIITA-202ENST00000381835 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
CIITA-202ENST00000381835 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
CIITA-202ENST00000381835 SETDB2Q96T68 719 aa15.25■□□□□ 0.03
CIITA-202ENST00000381835 PDE8AO60658 829 aa15.25■□□□□ 0.03
CIITA-202ENST00000381835 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
CIITA-202ENST00000381835 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
CIITA-202ENST00000381835 CTSWP56202 376 aa15.24■□□□□ 0.03
CIITA-202ENST00000381835 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
CIITA-202ENST00000381835 CCDC57Q2TAC2 916 aa15.24■□□□□ 0.03
CIITA-202ENST00000381835 PLEKHM2Q8IWE5 1019 aa15.24■□□□□ 0.03
CIITA-202ENST00000381835 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
CIITA-202ENST00000381835 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
CIITA-202ENST00000381835 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
CIITA-202ENST00000381835 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
CIITA-202ENST00000381835 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
CIITA-202ENST00000381835 ZNF594Q96JF6 807 aaPredicted RBP15.23■□□□□ 0.03
CIITA-202ENST00000381835 CSF1RP07333 972 aa15.23■□□□□ 0.03
CIITA-202ENST00000381835 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
CIITA-202ENST00000381835 SASH1O94885 1247 aa15.22■□□□□ 0.03
CIITA-202ENST00000381835 NBPF5PQ86XG9 351 aaPredicted RBP15.22■□□□□ 0.03
CIITA-202ENST00000381835 CAMKK2Q96RR4 588 aa15.22■□□□□ 0.03
CIITA-202ENST00000381835 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
CIITA-202ENST00000381835 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
CIITA-202ENST00000381835 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
CIITA-202ENST00000381835 TBC1D32Q96NH3 1257 aa15.22■□□□□ 0.03
CIITA-202ENST00000381835 GREM2Q9H772 168 aa15.22■□□□□ 0.03
CIITA-202ENST00000381835 TUBGCP6Q96RT7 1819 aa15.21■□□□□ 0.03
CIITA-202ENST00000381835 GYS1P13807 737 aa15.21■□□□□ 0.03
CIITA-202ENST00000381835 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
CIITA-202ENST00000381835 NPHP1O15259 732 aa15.21■□□□□ 0.02
CIITA-202ENST00000381835 ITGA6P23229 1130 aa15.21■□□□□ 0.02
CIITA-202ENST00000381835 BAG6P46379 1132 aa15.21■□□□□ 0.02
CIITA-202ENST00000381835 NFIXQ14938 502 aa15.21■□□□□ 0.02
CIITA-202ENST00000381835 DEFB132Q7Z7B7 95 aa15.21■□□□□ 0.02
CIITA-202ENST00000381835 CLASRPQ8N2M8 674 aaKnown RBP15.21■□□□□ 0.02
CIITA-202ENST00000381835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.21■□□□□ 0.02
CIITA-202ENST00000381835 TSHZ3Q63HK5 1081 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 CCDC24Q8N4L8 307 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 NYXQ9GZU5 481 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 ANTXR1Q9H6X2 564 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
CIITA-202ENST00000381835 COL24A1Q17RW2 1714 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 LRRC24Q50LG9 513 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 TPTE2Q6XPS3 522 aa15.2■□□□□ 0.02
CIITA-202ENST00000381835 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 MX1P20591 662 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 PDE1AP54750 535 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 COL23A1Q86Y22 540 aaPredicted RBP15.19■□□□□ 0.02
CIITA-202ENST00000381835 FAM43AQ8N2R8 423 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
CIITA-202ENST00000381835 LAMB2P55268 1798 aa15.19■□□□□ 0.02
CIITA-202ENST00000381835 TFCP2Q12800 502 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 CARMIL3Q8ND23 1372 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 SALL3Q9BXA9 1300 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 EYA2O00167 538 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 ATG9AQ7Z3C6 839 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 AACSQ86V21 672 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 ABCC12Q96J65 1359 aa15.18■□□□□ 0.02
CIITA-202ENST00000381835 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
CIITA-202ENST00000381835 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 BMP2KLQ5H9B9 411 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 CASZ1Q86V15 1759 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 GSPT1P15170 499 aaKnown RBP15.17■□□□□ 0.02
CIITA-202ENST00000381835 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
CIITA-202ENST00000381835 TTC22Q5TAA0 569 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 EAF2Q96CJ1 260 aaPredicted RBP15.17■□□□□ 0.02
CIITA-202ENST00000381835 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
CIITA-202ENST00000381835 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
CIITA-202ENST00000381835 OSBPL3Q9H4L5 887 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 SLC15A2Q16348 729 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 L1TD1Q5T7N2 865 aaKnown RBP15.16■□□□□ 0.02
CIITA-202ENST00000381835 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
CIITA-202ENST00000381835 CIAO1O76071 339 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 TM4SF1P30408 202 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 TAF1P21675 1872 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 TNNI3KQ59H18 835 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 FPGT-TNNI3KV9GXZ4 949 aa15.15■□□□□ 0.02
CIITA-202ENST00000381835 SERPINB2P05120 415 aa15.14■□□□□ 0.01
CIITA-202ENST00000381835 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
CIITA-202ENST00000381835 TLR7Q9NYK1 1049 aaKnown RBP15.14■□□□□ 0.01
CIITA-202ENST00000381835 CEP126Q9P2H0 1117 aa15.14■□□□□ 0.01
CIITA-202ENST00000381835 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
CIITA-202ENST00000381835 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
CIITA-202ENST00000381835 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms