RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PPEF1O14829 653 aaPredicted RBP24.53■■□□□ 1.52
GTF3A-201ENST00000381140 YY1P25490 414 aa24.53■■□□□ 1.52
GTF3A-201ENST00000381140 GRM8O00222 908 aa24.52■■□□□ 1.52
GTF3A-201ENST00000381140 CTSWP56202 376 aa24.51■■□□□ 1.51
GTF3A-201ENST00000381140 CCDC93Q567U6 631 aa24.51■■□□□ 1.51
GTF3A-201ENST00000381140 SOGA3Q5TF21 947 aa24.51■■□□□ 1.51
GTF3A-201ENST00000381140 SLC51AQ86UW1 340 aa24.51■■□□□ 1.51
GTF3A-201ENST00000381140 UTRNP46939 3433 aa24.51■■□□□ 1.51
GTF3A-201ENST00000381140 COL4A1P02462 1669 aa24.5■■□□□ 1.51
GTF3A-201ENST00000381140 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
GTF3A-201ENST00000381140 CASP7P55210 303 aa24.5■■□□□ 1.51
GTF3A-201ENST00000381140 GRAPQ13588 217 aa24.5■■□□□ 1.51
GTF3A-201ENST00000381140 CCDC152Q4G0S7 254 aa24.5■■□□□ 1.51
GTF3A-201ENST00000381140 GRAPLQ8TC17 118 aaPredicted RBP24.5■■□□□ 1.51
GTF3A-201ENST00000381140 C7orf43Q8WVR3 580 aa24.5■■□□□ 1.51
GTF3A-201ENST00000381140 SEC31BQ9NQW1 1179 aa24.49■■□□□ 1.51
GTF3A-201ENST00000381140 NFKBIEO00221 500 aa24.48■■□□□ 1.51
GTF3A-201ENST00000381140 CELF1Q92879 486 aaKnown RBP24.48■■□□□ 1.51
GTF3A-201ENST00000381140 TMX4Q9H1E5 349 aaPredicted RBP24.48■■□□□ 1.51
GTF3A-201ENST00000381140 TNNQ9UQP3 1299 aa24.48■■□□□ 1.51
GTF3A-201ENST00000381140 TAOK3Q9H2K8 898 aa24.47■■□□□ 1.51
GTF3A-201ENST00000381140 BBOX1O75936 387 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 CCT4P50991 539 aaKnown RBP24.46■■□□□ 1.51
GTF3A-201ENST00000381140 C9orf131Q5VYM1 1079 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 TTLL11Q8NHH1 800 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 ARHGAP45Q92619 1136 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 CLUAP1Q96AJ1 413 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 RNF181Q9P0P0 153 aa24.46■■□□□ 1.51
GTF3A-201ENST00000381140 DICER1Q9UPY3 1922 aaKnown RBP24.46■■□□□ 1.51
GTF3A-201ENST00000381140 NBPF7P0C2Y1 421 aaPredicted RBP24.45■■□□□ 1.5
GTF3A-201ENST00000381140 TRIM27P14373 513 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 PLA2G12BQ9BX93 195 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 GREM2Q9H772 168 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 CHMP3Q9Y3E7 222 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
GTF3A-201ENST00000381140 RTKN2Q8IZC4 609 aa24.44■■□□□ 1.5
GTF3A-201ENST00000381140 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
GTF3A-201ENST00000381140 RPS8P62241 208 aaKnown RBP24.43■■□□□ 1.5
GTF3A-201ENST00000381140 CC2D2BQ6DHV5 1058 aa24.43■■□□□ 1.5
GTF3A-201ENST00000381140 LRRC37AA6NMS7 1700 aa24.43■■□□□ 1.5
GTF3A-201ENST00000381140 LMNB1P20700 586 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 PRELPP51888 382 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 FOXO4P98177 505 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 FAM161AQ3B820 660 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 EPHA10Q5JZY3 1008 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 SUCLG2Q96I99 432 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 RCAN3Q9UKA8 241 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 FKBP4Q02790 459 aaKnown RBP eCLIP24.42■■□□□ 1.5
GTF3A-201ENST00000381140 ANKRD18AQ8IVF6 992 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 SP8Q8IXZ3 490 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 USP44Q9H0E7 712 aa24.42■■□□□ 1.5
GTF3A-201ENST00000381140 LMBR1LQ6UX01 489 aa24.41■■□□□ 1.5
GTF3A-201ENST00000381140 CDC5LQ99459 802 aaKnown RBP24.41■■□□□ 1.5
GTF3A-201ENST00000381140 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
GTF3A-201ENST00000381140 LTBP3Q9NS15 1303 aa24.4■■□□□ 1.5
GTF3A-201ENST00000381140 ITGA6P23229 1130 aa24.4■■□□□ 1.5
GTF3A-201ENST00000381140 TMC4Q7Z404 712 aa24.4■■□□□ 1.5
GTF3A-201ENST00000381140 UTYO14607 1347 aa24.4■■□□□ 1.5
GTF3A-201ENST00000381140 CSF1RP07333 972 aa24.39■■□□□ 1.49
GTF3A-201ENST00000381140 FTSJ3Q8IY81 847 aaKnown RBP24.39■■□□□ 1.49
GTF3A-201ENST00000381140 MPNDQ8N594 471 aa24.39■■□□□ 1.49
GTF3A-201ENST00000381140 RTL9Q8NET4 1388 aa24.38■■□□□ 1.49
GTF3A-201ENST00000381140 SNED1Q8TER0 1413 aa24.38■■□□□ 1.49
GTF3A-201ENST00000381140 INTS3Q68E01 1043 aaKnown RBP24.38■■□□□ 1.49
GTF3A-201ENST00000381140 DPP8Q6V1X1 898 aaPredicted RBP24.38■■□□□ 1.49
GTF3A-201ENST00000381140 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
GTF3A-201ENST00000381140 ANKRD18BA2A2Z9 1011 aa24.37■■□□□ 1.49
GTF3A-201ENST00000381140 UBTFL1P0CB47 393 aaPredicted RBP24.37■■□□□ 1.49
GTF3A-201ENST00000381140 GRIPAP1Q4V328 841 aa24.37■■□□□ 1.49
GTF3A-201ENST00000381140 KAZALD1Q96I82 304 aa24.37■■□□□ 1.49
GTF3A-201ENST00000381140 BICC1Q9H694 974 aaKnown RBP24.37■■□□□ 1.49
GTF3A-201ENST00000381140 IGHMBP2P38935 993 aaKnown RBP24.36■■□□□ 1.49
GTF3A-201ENST00000381140 IFIT5Q13325 482 aaKnown RBP24.36■■□□□ 1.49
GTF3A-201ENST00000381140 TMEM57Q8N5G2 664 aa24.36■■□□□ 1.49
GTF3A-201ENST00000381140 PSMD1Q99460 953 aa24.36■■□□□ 1.49
GTF3A-201ENST00000381140 NSFL1CQ9UNZ2 370 aaKnown RBP24.36■■□□□ 1.49
GTF3A-201ENST00000381140 GPSM2P81274 684 aa24.35■■□□□ 1.49
GTF3A-201ENST00000381140 DZIP1LQ8IYY4 767 aaKnown RBP24.35■■□□□ 1.49
GTF3A-201ENST00000381140 MEIS3Q99687 375 aa24.35■■□□□ 1.49
GTF3A-201ENST00000381140 IARSP41252 1262 aaKnown RBP24.34■■□□□ 1.49
GTF3A-201ENST00000381140 CCDC57Q2TAC2 916 aa24.34■■□□□ 1.49
GTF3A-201ENST00000381140 TAF7LQ5H9L4 462 aa24.34■■□□□ 1.49
GTF3A-201ENST00000381140 MPHOSPH8Q99549 860 aa24.33■■□□□ 1.49
GTF3A-201ENST00000381140 ANKIB1Q9P2G1 1089 aa24.33■■□□□ 1.49
GTF3A-201ENST00000381140 DUOX1Q9NRD9 1551 aa24.33■■□□□ 1.49
GTF3A-201ENST00000381140 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 C6orf229H3BNL8 230 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 PLIN1O60240 522 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 RLBP1P12271 317 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 ZNF784Q8NCA9 323 aaPredicted RBP24.32■■□□□ 1.48
GTF3A-201ENST00000381140 SUPT20HQ8NEM7 779 aa24.32■■□□□ 1.48
GTF3A-201ENST00000381140 ZNF594Q96JF6 807 aaPredicted RBP24.32■■□□□ 1.48
GTF3A-201ENST00000381140 PPIP5K2O43314 1243 aa24.31■■□□□ 1.48
GTF3A-201ENST00000381140 ITPRIPQ8IWB1 547 aa24.31■■□□□ 1.48
GTF3A-201ENST00000381140 LARGE2Q8N3Y3 721 aa24.31■■□□□ 1.48
GTF3A-201ENST00000381140 PANK1Q8TE04 598 aa24.31■■□□□ 1.48
GTF3A-201ENST00000381140 BSDC1Q9NW68 430 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms