RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 TJP1Q07157 1748 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 A0A0D9SFI3 127 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 CIAO1O76071 339 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
PUDP-201ENST00000381077 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 TAF5LO75529 589 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 IL2RBP14784 551 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 GJB2P29033 226 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 MCM5P33992 734 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
PUDP-201ENST00000381077 CCDC183Q5T5S1 534 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
PUDP-201ENST00000381077 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
PUDP-201ENST00000381077 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.1■□□□□ 0.01
PUDP-201ENST00000381077 SYCE3A1L190 88 aa15.1■□□□□ 0.01
PUDP-201ENST00000381077 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
PUDP-201ENST00000381077 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
PUDP-201ENST00000381077 FOXO4P98177 505 aa15.09■□□□□ 0.01
PUDP-201ENST00000381077 TFCP2Q12800 502 aa15.09■□□□□ 0.01
PUDP-201ENST00000381077 TOM1L2Q6ZVM7 507 aa15.09■□□□□ 0.01
PUDP-201ENST00000381077 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
PUDP-201ENST00000381077 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
PUDP-201ENST00000381077 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0.01
PUDP-201ENST00000381077 ME3Q16798 604 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 MCMDC2Q4G0Z9 681 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 CCDC83Q8IWF9 413 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 HELLSQ9NRZ9 838 aa15.08■□□□□ 0.01
PUDP-201ENST00000381077 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0.01
PUDP-201ENST00000381077 TCHHQ07283 1943 aa15.08■□□□□ 0
PUDP-201ENST00000381077 ELP1O95163 1332 aa15.08■□□□□ 0
PUDP-201ENST00000381077 NBPF26B4DH59 902 aa15.08■□□□□ 0
PUDP-201ENST00000381077 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
PUDP-201ENST00000381077 NBPF14Q5TI25 921 aa15.08■□□□□ 0
PUDP-201ENST00000381077 FOXD4L5Q5VV16 416 aaPredicted RBP15.08■□□□□ 0
PUDP-201ENST00000381077 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
PUDP-201ENST00000381077 NBPF15Q8N660 670 aa15.08■□□□□ 0
PUDP-201ENST00000381077 FOXD4L4Q8WXT5 416 aaPredicted RBP15.08■□□□□ 0
PUDP-201ENST00000381077 LARGE1O95461 756 aa15.07■□□□□ 0
PUDP-201ENST00000381077 LMBR1LQ6UX01 489 aa15.07■□□□□ 0
PUDP-201ENST00000381077 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
PUDP-201ENST00000381077 ABCC12Q96J65 1359 aa15.07■□□□□ 0
PUDP-201ENST00000381077 TPCN1Q9ULQ1 816 aa15.07■□□□□ 0
PUDP-201ENST00000381077 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
PUDP-201ENST00000381077 DSCC1Q9BVC3 393 aa15.06■□□□□ 0
PUDP-201ENST00000381077 NOL7Q9UMY1 257 aaKnown RBP15.06■□□□□ 0
PUDP-201ENST00000381077 ZNF609O15014 1411 aa15.06■□□□□ 0
PUDP-201ENST00000381077 ATP5J2-PTCD1G3V325 749 aa15.05■□□□□ 0
PUDP-201ENST00000381077 PTCD1O75127 700 aaKnown RBP15.05■□□□□ 0
PUDP-201ENST00000381077 MSNP26038 577 aaKnown RBP15.05■□□□□ 0
PUDP-201ENST00000381077 ST3GAL1Q11201 340 aa15.05■□□□□ 0
PUDP-201ENST00000381077 ZNF589Q86UQ0 364 aaPredicted RBP15.05■□□□□ 0
PUDP-201ENST00000381077 ISCA1Q9BUE6 129 aa15.05■□□□□ 0
PUDP-201ENST00000381077 PLA2G12BQ9BX93 195 aa15.05■□□□□ 0
PUDP-201ENST00000381077 EYA2O00167 538 aa15.05■□□□□ -0
PUDP-201ENST00000381077 KRT85P78386 507 aa15.05■□□□□ -0
PUDP-201ENST00000381077 ATG9AQ7Z3C6 839 aa15.05■□□□□ -0
PUDP-201ENST00000381077 NEK1Q96PY6 1258 aa15.05■□□□□ -0
PUDP-201ENST00000381077 DBNDD2Q9BQY9 259 aa15.05■□□□□ -0
PUDP-201ENST00000381077 SLAIN2Q9P270 581 aa15.05■□□□□ -0
PUDP-201ENST00000381077 LRP6O75581 1613 aa15.05■□□□□ -0
PUDP-201ENST00000381077 CPA1P15085 419 aa15.04■□□□□ -0
PUDP-201ENST00000381077 TOB2Q14106 344 aaPredicted RBP15.04■□□□□ -0
PUDP-201ENST00000381077 LARP1BQ659C4 914 aaKnown RBP15.04■□□□□ -0
PUDP-201ENST00000381077 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
PUDP-201ENST00000381077 CCDC39Q9UFE4 941 aa15.04■□□□□ -0
PUDP-201ENST00000381077 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
PUDP-201ENST00000381077 STRCQ7RTU9 1775 aa15.04■□□□□ -0
PUDP-201ENST00000381077 GADD45BO75293 160 aaPredicted RBP15.04■□□□□ -0
PUDP-201ENST00000381077 FBXL16Q8N461 479 aa15.03■□□□□ -0
PUDP-201ENST00000381077 CHAMP1Q96JM3 812 aa15.03■□□□□ -0
PUDP-201ENST00000381077 SCAND2PQ9GZW5 306 aaPredicted RBP15.03■□□□□ -0
PUDP-201ENST00000381077 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
PUDP-201ENST00000381077 ZNF500O60304 480 aaPredicted RBP15.02■□□□□ -0
PUDP-201ENST00000381077 TERF1P54274 439 aa15.02■□□□□ -0
PUDP-201ENST00000381077 TCIRG1Q13488 830 aa15.02■□□□□ -0
PUDP-201ENST00000381077 TTLL7Q6ZT98 887 aa15.02■□□□□ -0
PUDP-201ENST00000381077 PAG1Q9NWQ8 432 aa15.02■□□□□ -0
PUDP-201ENST00000381077 TOGARAM1Q9Y4F4 1720 aa15.02■□□□□ -0
PUDP-201ENST00000381077 ZMYM1Q5SVZ6 1142 aa15.02□□□□□ -0.01
PUDP-201ENST00000381077 GTF3C6Q969F1 213 aa15.02□□□□□ -0.01
PUDP-201ENST00000381077 AGXT2Q9BYV1 514 aa15.02□□□□□ -0.01
PUDP-201ENST00000381077 KIF3AQ9Y496 699 aa15.02□□□□□ -0.01
PUDP-201ENST00000381077 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
PUDP-201ENST00000381077 GDPD2Q9HCC8 539 aa15.01□□□□□ -0.01
PUDP-201ENST00000381077 PCCAP05165 728 aaPredicted RBP15.01□□□□□ -0.01
PUDP-201ENST00000381077 DNAJC2Q99543 621 aaKnown RBP15.01□□□□□ -0.01
PUDP-201ENST00000381077 ZSCAN16Q9H4T2 348 aaPredicted RBP15.01□□□□□ -0.01
PUDP-201ENST00000381077 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
PUDP-201ENST00000381077 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
PUDP-201ENST00000381077 A1BGP04217 495 aa15□□□□□ -0.01
PUDP-201ENST00000381077 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
PUDP-201ENST00000381077 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
PUDP-201ENST00000381077 ZKSCAN5Q9Y2L8 839 aa15□□□□□ -0.01
PUDP-201ENST00000381077 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
PUDP-201ENST00000381077 FIBPO43427 364 aa14.99□□□□□ -0.01
PUDP-201ENST00000381077 CYP21A2P08686 494 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms