RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 SLC4A10Q6U841 1118 aa18.79■□□□□ 0.6
VCX3B-201ENST00000381029 GRAPLQ8TC17 118 aaPredicted RBP18.79■□□□□ 0.6
VCX3B-201ENST00000381029 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
VCX3B-201ENST00000381029 SBF1O95248 1867 aa18.79■□□□□ 0.6
VCX3B-201ENST00000381029 TAF1P21675 1872 aa18.79■□□□□ 0.6
VCX3B-201ENST00000381029 RTL9Q8NET4 1388 aa18.79■□□□□ 0.6
VCX3B-201ENST00000381029 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
VCX3B-201ENST00000381029 GRM8O00222 908 aa18.78■□□□□ 0.6
VCX3B-201ENST00000381029 CSF1RP07333 972 aa18.78■□□□□ 0.6
VCX3B-201ENST00000381029 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
VCX3B-201ENST00000381029 SOGA3Q5TF21 947 aa18.78■□□□□ 0.6
VCX3B-201ENST00000381029 CELF1Q92879 486 aaKnown RBP18.78■□□□□ 0.6
VCX3B-201ENST00000381029 KAZALD1Q96I82 304 aa18.78■□□□□ 0.6
VCX3B-201ENST00000381029 PPEF1O14829 653 aaPredicted RBP18.77■□□□□ 0.6
VCX3B-201ENST00000381029 BBOX1O75936 387 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 FOXO4P98177 505 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 EPHA10Q5JZY3 1008 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
VCX3B-201ENST00000381029 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 TNNQ9UQP3 1299 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
VCX3B-201ENST00000381029 LRRC37AA6NMS7 1700 aa18.77■□□□□ 0.59
VCX3B-201ENST00000381029 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
VCX3B-201ENST00000381029 CC2D2BQ6DHV5 1058 aa18.76■□□□□ 0.59
VCX3B-201ENST00000381029 API5Q9BZZ5 524 aaKnown RBP18.76■□□□□ 0.59
VCX3B-201ENST00000381029 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
VCX3B-201ENST00000381029 TRIM27P14373 513 aa18.75■□□□□ 0.59
VCX3B-201ENST00000381029 CCDC152Q4G0S7 254 aa18.75■□□□□ 0.59
VCX3B-201ENST00000381029 C9orf131Q5VYM1 1079 aa18.75■□□□□ 0.59
VCX3B-201ENST00000381029 SP8Q8IXZ3 490 aa18.75■□□□□ 0.59
VCX3B-201ENST00000381029 GREM2Q9H772 168 aa18.75■□□□□ 0.59
VCX3B-201ENST00000381029 MYH3P11055 1940 aa18.74■□□□□ 0.59
VCX3B-201ENST00000381029 LMNB1P20700 586 aa18.74■□□□□ 0.59
VCX3B-201ENST00000381029 FKBP4Q02790 459 aaKnown RBP eCLIP18.74■□□□□ 0.59
VCX3B-201ENST00000381029 INTS3Q68E01 1043 aaKnown RBP18.74■□□□□ 0.59
VCX3B-201ENST00000381029 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
VCX3B-201ENST00000381029 PSMD1Q99460 953 aa18.74■□□□□ 0.59
VCX3B-201ENST00000381029 TAOK3Q9H2K8 898 aa18.74■□□□□ 0.59
VCX3B-201ENST00000381029 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
VCX3B-201ENST00000381029 RPS8P62241 208 aaKnown RBP18.73■□□□□ 0.59
VCX3B-201ENST00000381029 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
VCX3B-201ENST00000381029 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
VCX3B-201ENST00000381029 SUCLG2Q96I99 432 aa18.73■□□□□ 0.59
VCX3B-201ENST00000381029 RTFDC1Q9BY42 306 aaPredicted RBP18.73■□□□□ 0.59
VCX3B-201ENST00000381029 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
VCX3B-201ENST00000381029 CCT4P50991 539 aaKnown RBP18.72■□□□□ 0.59
VCX3B-201ENST00000381029 GRIPAP1Q4V328 841 aa18.72■□□□□ 0.59
VCX3B-201ENST00000381029 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
VCX3B-201ENST00000381029 COL4A5P29400 1685 aa18.72■□□□□ 0.59
VCX3B-201ENST00000381029 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
VCX3B-201ENST00000381029 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
VCX3B-201ENST00000381029 ZNF784Q8NCA9 323 aaPredicted RBP18.71■□□□□ 0.59
VCX3B-201ENST00000381029 C9orf78Q9NZ63 289 aaPredicted RBP18.71■□□□□ 0.59
VCX3B-201ENST00000381029 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
VCX3B-201ENST00000381029 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
VCX3B-201ENST00000381029 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
VCX3B-201ENST00000381029 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
VCX3B-201ENST00000381029 ITGA6P23229 1130 aa18.69■□□□□ 0.58
VCX3B-201ENST00000381029 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
VCX3B-201ENST00000381029 ZNF277Q9NRM2 450 aaPredicted RBP18.69■□□□□ 0.58
VCX3B-201ENST00000381029 DICER1Q9UPY3 1922 aaKnown RBP18.68■□□□□ 0.58
VCX3B-201ENST00000381029 RLBP1P12271 317 aa18.68■□□□□ 0.58
VCX3B-201ENST00000381029 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
VCX3B-201ENST00000381029 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
VCX3B-201ENST00000381029 BSDC1Q9NW68 430 aaPredicted RBP18.68■□□□□ 0.58
VCX3B-201ENST00000381029 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
VCX3B-201ENST00000381029 CCDC88AQ3V6T2 1871 aa18.68■□□□□ 0.58
VCX3B-201ENST00000381029 GPSM2P81274 684 aa18.67■□□□□ 0.58
VCX3B-201ENST00000381029 CDC5LQ99459 802 aaKnown RBP18.67■□□□□ 0.58
VCX3B-201ENST00000381029 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
VCX3B-201ENST00000381029 IARSP41252 1262 aaKnown RBP18.66■□□□□ 0.58
VCX3B-201ENST00000381029 ANKRD18AQ8IVF6 992 aa18.66■□□□□ 0.58
VCX3B-201ENST00000381029 MPNDQ8N594 471 aa18.66■□□□□ 0.58
VCX3B-201ENST00000381029 MEIS3Q99687 375 aa18.66■□□□□ 0.58
VCX3B-201ENST00000381029 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
VCX3B-201ENST00000381029 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
VCX3B-201ENST00000381029 TMEM57Q8N5G2 664 aa18.65■□□□□ 0.58
VCX3B-201ENST00000381029 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
VCX3B-201ENST00000381029 POLLQ9UGP5 575 aa18.65■□□□□ 0.58
VCX3B-201ENST00000381029 DPP8Q6V1X1 898 aaPredicted RBP18.64■□□□□ 0.57
VCX3B-201ENST00000381029 VPS33BQ9H267 617 aa18.64■□□□□ 0.57
VCX3B-201ENST00000381029 MINPP1Q9UNW1 487 aa18.64■□□□□ 0.57
VCX3B-201ENST00000381029 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
VCX3B-201ENST00000381029 WTIPA6NIX2 430 aaPredicted RBP18.63■□□□□ 0.57
VCX3B-201ENST00000381029 FZD9O00144 591 aa18.63■□□□□ 0.57
VCX3B-201ENST00000381029 KIAA2012Q0VF49 1180 aa18.63■□□□□ 0.57
VCX3B-201ENST00000381029 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
VCX3B-201ENST00000381029 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
VCX3B-201ENST00000381029 IFIT5Q13325 482 aaKnown RBP18.62■□□□□ 0.57
VCX3B-201ENST00000381029 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
VCX3B-201ENST00000381029 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
VCX3B-201ENST00000381029 ZNF594Q96JF6 807 aaPredicted RBP18.62■□□□□ 0.57
VCX3B-201ENST00000381029 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
VCX3B-201ENST00000381029 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
VCX3B-201ENST00000381029 AOC3Q16853 763 aa18.61■□□□□ 0.57
VCX3B-201ENST00000381029 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
VCX3B-201ENST00000381029 XDHP47989 1333 aa18.6■□□□□ 0.57
VCX3B-201ENST00000381029 GLTPD2A6NH11 291 aa18.6■□□□□ 0.57
VCX3B-201ENST00000381029 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms