RNA–Protein interactions for RNA: ENST00000380849.6

TTC39A-205, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-205ENST00000380849 CTSWP56202 376 aa17.63■□□□□ 0.41
TTC39A-205ENST00000380849 CSF1RP07333 972 aa17.62■□□□□ 0.41
TTC39A-205ENST00000380849 UBTFL1P0CB47 393 aaPredicted RBP17.62■□□□□ 0.41
TTC39A-205ENST00000380849 GPR162Q16538 588 aa17.62■□□□□ 0.41
TTC39A-205ENST00000380849 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
TTC39A-205ENST00000380849 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
TTC39A-205ENST00000380849 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
TTC39A-205ENST00000380849 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
TTC39A-205ENST00000380849 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
TTC39A-205ENST00000380849 GRAPQ13588 217 aa17.61■□□□□ 0.41
TTC39A-205ENST00000380849 TTLL11Q8NHH1 800 aa17.61■□□□□ 0.41
TTC39A-205ENST00000380849 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
TTC39A-205ENST00000380849 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
TTC39A-205ENST00000380849 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
TTC39A-205ENST00000380849 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
TTC39A-205ENST00000380849 TMEM57Q8N5G2 664 aa17.6■□□□□ 0.41
TTC39A-205ENST00000380849 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
TTC39A-205ENST00000380849 COL11A2P13942 1736 aaPredicted RBP17.6■□□□□ 0.41
TTC39A-205ENST00000380849 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
TTC39A-205ENST00000380849 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
TTC39A-205ENST00000380849 FOXO4P98177 505 aa17.58■□□□□ 0.4
TTC39A-205ENST00000380849 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.4
TTC39A-205ENST00000380849 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
TTC39A-205ENST00000380849 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
TTC39A-205ENST00000380849 RTKN2Q8IZC4 609 aa17.58■□□□□ 0.4
TTC39A-205ENST00000380849 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
TTC39A-205ENST00000380849 GNAI2P04899 355 aa17.57■□□□□ 0.4
TTC39A-205ENST00000380849 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
TTC39A-205ENST00000380849 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
TTC39A-205ENST00000380849 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
TTC39A-205ENST00000380849 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
TTC39A-205ENST00000380849 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
TTC39A-205ENST00000380849 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
TTC39A-205ENST00000380849 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-205ENST00000380849 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-205ENST00000380849 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
TTC39A-205ENST00000380849 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
TTC39A-205ENST00000380849 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
TTC39A-205ENST00000380849 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
TTC39A-205ENST00000380849 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
TTC39A-205ENST00000380849 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
TTC39A-205ENST00000380849 ITGA6P23229 1130 aa17.55■□□□□ 0.4
TTC39A-205ENST00000380849 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
TTC39A-205ENST00000380849 MEIS3Q99687 375 aa17.55■□□□□ 0.4
TTC39A-205ENST00000380849 BICC1Q9H694 974 aaKnown RBP17.55■□□□□ 0.4
TTC39A-205ENST00000380849 GREM2Q9H772 168 aa17.55■□□□□ 0.4
TTC39A-205ENST00000380849 SRCAPQ6ZRS2 3230 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 PLIN1O60240 522 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 RLBP1P12271 317 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 AAMPQ13685 434 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 VPS33BQ9H267 617 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
TTC39A-205ENST00000380849 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
TTC39A-205ENST00000380849 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 C21orf2O43822 256 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 YBX3P16989 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
TTC39A-205ENST00000380849 MTX1Q13505 466 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
TTC39A-205ENST00000380849 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
TTC39A-205ENST00000380849 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
TTC39A-205ENST00000380849 PSMD1Q99460 953 aa17.52■□□□□ 0.4
TTC39A-205ENST00000380849 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
TTC39A-205ENST00000380849 CACNA1SQ13698 1873 aa17.52■□□□□ 0.39
TTC39A-205ENST00000380849 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
TTC39A-205ENST00000380849 FAM161AQ3B820 660 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
TTC39A-205ENST00000380849 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
TTC39A-205ENST00000380849 MPNDQ8N594 471 aa17.5■□□□□ 0.39
TTC39A-205ENST00000380849 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
TTC39A-205ENST00000380849 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
TTC39A-205ENST00000380849 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
TTC39A-205ENST00000380849 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
TTC39A-205ENST00000380849 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
TTC39A-205ENST00000380849 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
TTC39A-205ENST00000380849 LMNB1P20700 586 aa17.48■□□□□ 0.39
TTC39A-205ENST00000380849 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
TTC39A-205ENST00000380849 RPAP2Q8IXW5 612 aaPredicted RBP17.48■□□□□ 0.39
TTC39A-205ENST00000380849 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
TTC39A-205ENST00000380849 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
TTC39A-205ENST00000380849 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
TTC39A-205ENST00000380849 XDHP47989 1333 aa17.47■□□□□ 0.39
TTC39A-205ENST00000380849 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
TTC39A-205ENST00000380849 EYA3Q99504 573 aa17.47■□□□□ 0.39
TTC39A-205ENST00000380849 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
TTC39A-205ENST00000380849 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
TTC39A-205ENST00000380849 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
TTC39A-205ENST00000380849 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
TTC39A-205ENST00000380849 HMMRO75330 724 aa17.46■□□□□ 0.39
TTC39A-205ENST00000380849 CIAO1O76071 339 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms