RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CEP135Q66GS9 1140 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 TMCO5BA8MYB1 307 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 MCMDC2Q4G0Z9 681 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 HOOK3Q86VS8 718 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 CTNNBL1Q8WYA6 563 aaPredicted RBP18.41■□□□□ 0.54
COL2A1-202ENST00000380518 TMX1Q9H3N1 280 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 MACROD2A1Z1Q3 448 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
COL2A1-202ENST00000380518 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 KSR2Q6VAB6 950 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 GOPCQ9HD26 462 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 MRPS27Q92552 414 aaKnown RBP18.41■□□□□ 0.54
COL2A1-202ENST00000380518 ALG1Q9BT22 464 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 COPS6Q7L5N1 327 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 TRIM47Q96LD4 638 aa18.41■□□□□ 0.54
COL2A1-202ENST00000380518 DYNC1I1O14576 645 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 ESR2Q92731 530 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 NUP160Q12769 1436 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
COL2A1-202ENST00000380518 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
COL2A1-202ENST00000380518 UBASH3AP57075 661 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 SPAG1Q07617 926 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 CABP5Q9NP86 173 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 STX8Q9UNK0 236 aa18.4■□□□□ 0.54
COL2A1-202ENST00000380518 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.54
COL2A1-202ENST00000380518 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.54
COL2A1-202ENST00000380518 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
COL2A1-202ENST00000380518 AKR1B10O60218 316 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 BMS1Q14692 1282 aaKnown RBP18.39■□□□□ 0.53
COL2A1-202ENST00000380518 MICALCLQ6ZW33 695 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 NOP2P46087 812 aaKnown RBP18.39■□□□□ 0.53
COL2A1-202ENST00000380518 LMBR1LQ6UX01 489 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.53
COL2A1-202ENST00000380518 FAM107BQ9H098 131 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 NGLY1Q96IV0 654 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.53
COL2A1-202ENST00000380518 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 FEZ1Q99689 392 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 EXOC1Q9NV70 894 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 F13A1P00488 732 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 GSTO1P78417 241 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 ANO6Q4KMQ2 910 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 CHRNA2Q15822 529 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 RTN1Q16799 776 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
COL2A1-202ENST00000380518 BCCIPQ9P287 314 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL2A1-202ENST00000380518 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL2A1-202ENST00000380518 TTC41PQ6P2S7 1318 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 SKILP12757 684 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 CTNNA2P26232 953 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 GNAQP50148 359 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 Q6ZUG5 572 aa18.37■□□□□ 0.53
COL2A1-202ENST00000380518 CYP7A1P22680 504 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 RRAGBQ5VZM2 374 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 PPP4R3BQ5MIZ7 849 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
COL2A1-202ENST00000380518 CCDC175P0C221 793 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 PRPF4BQ13523 1007 aaKnown RBP18.36■□□□□ 0.53
COL2A1-202ENST00000380518 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
COL2A1-202ENST00000380518 IFI16Q16666 785 aaKnown RBP18.36■□□□□ 0.53
COL2A1-202ENST00000380518 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
COL2A1-202ENST00000380518 CCDC186Q7Z3E2 898 aa18.36■□□□□ 0.53
COL2A1-202ENST00000380518 TNRQ92752 1358 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 PRC1O43663 620 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 MYO1BO43795 1136 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 CYLC1P35663 651 aaPredicted RBP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 WDR78Q5VTH9 848 aa18.35■□□□□ 0.53
COL2A1-202ENST00000380518 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
COL2A1-202ENST00000380518 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
COL2A1-202ENST00000380518 DNM1Q05193 864 aaKnown RBP18.34■□□□□ 0.53
COL2A1-202ENST00000380518 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL2A1-202ENST00000380518 CCDC172P0C7W6 258 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 AFMP43652 599 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms