RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 EVC2Q86UK5 1308 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 ST18O60284 1047 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 CALRP27797 417 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 PTPN14Q15678 1187 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 ARHGAP29Q52LW3 1261 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 JAKMIP3Q5VZ66 844 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 FILIP1Q7Z7B0 1213 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 RUNDC1Q96C34 613 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 PDRG1Q9NUG6 133 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 SETD1BQ9UPS6 1966 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 DIAPH1O60610 1272 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 GCFC2P16383 781 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 ELF1P32519 619 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 TMCO3Q6UWJ1 677 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 RILPL2Q969X0 211 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 FAM163AQ96GL9 167 aaPredicted RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 SLX1AQ9BQ83 275 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 SRCIN1Q9C0H9 1055 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 AKAP2Q9Y2D5 859 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 FRMPD1Q5SYB0 1578 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 RSRC2Q7L4I2 434 aaKnown RBP7.67□□□□□ -1.18
RIPK1-202ENST00000380409 TEX11Q8IYF3 940 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
RIPK1-202ENST00000380409 QRICH2Q9H0J4 1663 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 PREPLQ4J6C6 727 aaPredicted RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CCDC30Q5VVM6 783 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CWC27Q6UX04 472 aaKnown RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 SSH2Q76I76 1423 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 SIRT2Q8IXJ6 389 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 GDPD2Q9HCC8 539 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 KDRP35968 1356 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 ATF7IPQ6VMQ6 1270 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CCDC26Q8TAB7 109 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CDK12Q9NYV4 1490 aaPredicted RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 ADGRB1O14514 1584 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 MAST1Q9Y2H9 1570 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 ADGRL3Q9HAR2 1447 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 TPM1P09493 284 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 EIF2S2P20042 333 aaKnown RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 RBM5P52756 815 aaKnown RBP eCLIP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CCDC96Q2M329 555 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 TTC22Q5TAA0 569 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 TTC19Q6DKK2 380 aaPredicted RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 GIMAP6Q6P9H5 292 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 PLEKHM2Q8IWE5 1019 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 MRFAP1L1Q96HT8 127 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
RIPK1-202ENST00000380409 CDC42BPGQ6DT37 1551 aa7.66□□□□□ -1.18
RIPK1-202ENST00000380409 ERVK-7P63135 1459 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 MLH3Q9UHC1 1453 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 NUTM2BA6NNL0 878 aaPredicted RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 EFCAB8A8MWE9 144 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 NUTM2EB1AL46 878 aaPredicted RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 TUBB4AP04350 444 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 FBLN1P23142 703 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 PAX7P23759 505 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 FNTAP49354 379 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 CRYMQ14894 314 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 TBC1D25Q3MII6 688 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 E4F1Q66K89 784 aaPredicted RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 ERC1Q8IUD2 1116 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 NUTM2AQ8IVF1 878 aaPredicted RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 TMEM57Q8N5G2 664 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 DDX17Q92841 729 aaKnown RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 THUMPD2Q9BTF0 503 aaKnown RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 NRXN1Q9ULB1 1477 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 LMAN1P49257 510 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 MCM2P49736 904 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 CDCA2Q69YH5 1023 aaPredicted RBP7.65□□□□□ -1.18
RIPK1-202ENST00000380409 MICALL1Q8N3F8 863 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 TTC41PQ6P2S7 1318 aa7.65□□□□□ -1.18
RIPK1-202ENST00000380409 FAM135BQ49AJ0 1406 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 DIP2CQ9Y2E4 1556 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 SHOX2O60902 331 aaPredicted RBP7.65□□□□□ -1.19
RIPK1-202ENST00000380409 PPFIA4O75335 1185 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 SCRN1Q12765 414 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 TLDC1Q6P9B6 456 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 CBX8Q9HC52 389 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 CNPY2Q9Y2B0 182 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 ATP10DQ9P241 1426 aa7.65□□□□□ -1.19
RIPK1-202ENST00000380409 LMTK2Q8IWU2 1503 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 H0YHG0 523 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 IPO7O95373 1038 aaKnown RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 CCNHP51946 323 aaPredicted RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 SARNPP82979 210 aaKnown RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 HNRNPLLQ8WVV9 542 aaKnown RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 ARGLU1Q9NWB6 273 aaPredicted RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 WDR33Q9C0J8 1336 aaKnown RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 LMTK3Q96Q04 1460 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 PSDA5PKW4 1024 aaPredicted RBP7.64□□□□□ -1.19
RIPK1-202ENST00000380409 TMCO5BA8MYB1 307 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 TRIM65Q6PJ69 517 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 LUZP1Q86V48 1076 aa7.64□□□□□ -1.19
RIPK1-202ENST00000380409 COG3Q96JB2 828 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms