RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 SMC6Q96SB8 1091 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 MED4Q9NPJ6 270 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 RAB11FIP4Q86YS3 637 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 LMBR1Q8WVP7 490 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 GUCA1BQ9UMX6 200 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 SNCBQ16143 134 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 ICE2Q659A1 982 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
CCDC85C-201ENST00000380243 KIF5AQ12840 1032 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 UTP14AQ9BVJ6 771 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 POLR3DP05423 398 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 KRT86O43790 486 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 VIMP08670 466 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 IKQ13123 557 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 ECHDC1Q9NTX5 307 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 AKR1B15C9JRZ8 316 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 BOLA2Q9H3K6 86 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 LMBRD1Q9NUN5 540 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 MCTP2Q6DN12 878 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 CCDC42Q96M95 316 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 MXRA7P84157 204 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
CCDC85C-201ENST00000380243 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 RIPOR2Q9Y4F9 1068 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 ZNF853P0CG23 659 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 RLBP1P12271 317 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 MAP3K1Q13233 1512 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 TDRD12Q587J7 1177 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 NKIRAS1Q9NYS0 192 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 CARD6Q9BX69 1037 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 MAP7Q14244 749 aa11.9□□□□□ -0.5
CCDC85C-201ENST00000380243 LIG3P49916 1009 aa11.9□□□□□ -0.51
CCDC85C-201ENST00000380243 SEPT14Q6ZU15 432 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 A0A087WZG4 1122 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 DESP17661 470 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 IFT20Q8IY31 132 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 PPP2R5AQ15172 486 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 LRRC45Q96CN5 670 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 KCNK9Q9NPC2 374 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 TNNC1P63316 161 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 DBN1Q16643 649 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
CCDC85C-201ENST00000380243 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 FYCO1Q9BQS8 1478 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 PRPHP41219 470 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 RABEP2Q9H5N1 569 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 UBXN1Q04323 297 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 E2F4Q16254 413 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
CCDC85C-201ENST00000380243 AMPD3Q01432 767 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 ARHGAP45Q92619 1136 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 CLSTN2Q9H4D0 955 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 PPFIA3O75145 1194 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 BMP15O95972 392 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 ERCC6LQ2NKX8 1250 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
CCDC85C-201ENST00000380243 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms