RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 BICC1Q9H694 974 aaKnown RBP11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 HEG1Q9ULI3 1381 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 TNNT1P13805 278 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 ZNF165P49910 485 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 SYCP1Q15431 976 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 KLHDC4Q8TBB5 520 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
NHLRC3-202ENST00000379600 ALDH1L1O75891 902 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 PSMA5P28066 241 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 KCNJ4P48050 445 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 ERC1Q8IUD2 1116 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 C9orf78Q9NZ63 289 aaPredicted RBP11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 UTYO14607 1347 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 A0A087WWV3 80 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 TAF5LO75529 589 aa11.07□□□□□ -0.64
NHLRC3-202ENST00000379600 ERBB3P21860 1342 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 MPRIPQ6WCQ1 1025 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 ABTB2Q8N961 1025 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 GTF3C6Q969F1 213 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 DBF4Q9UBU7 674 aaPredicted RBP11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 CDC25BP30305 580 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 BRF1Q92994 677 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 GOLPH3LQ9H4A5 285 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 ESF1Q9H501 851 aaKnown RBP11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 ANKRD1Q15327 319 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 LRRC8AQ8IWT6 810 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 FEZ1Q99689 392 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
NHLRC3-202ENST00000379600 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 FSD1Q9BTV5 496 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 SIL1Q9H173 461 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 OGFRQ9NZT2 677 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 GRM8O00222 908 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 HIP1O00291 1037 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 KIF20AO95235 890 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 SARM1Q6SZW1 724 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 BICD2Q8TD16 824 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 IP6K1Q92551 441 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 C5P01031 1676 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 ZNF609O15014 1411 aa11.05□□□□□ -0.64
NHLRC3-202ENST00000379600 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 SNW1Q13573 536 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 PDIA6Q15084 440 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 EPHA10Q5JZY3 1008 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 DHX40Q8IX18 779 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 CCZ1BP86790 482 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 TPD52L1Q16890 204 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 CEBPAP49715 358 aaPredicted RBP11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 SCRN1Q12765 414 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
NHLRC3-202ENST00000379600 CTDNEP1O95476 244 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 CEP135Q66GS9 1140 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 Q6ZUG5 572 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 KIF18AQ8NI77 898 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 SEC62Q99442 399 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 HMG20BQ9P0W2 317 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 CEBPZQ03701 1054 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 SMARCC2Q8TAQ2 1214 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 MRFAP1L1Q96HT8 127 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 NCAPD2Q15021 1401 aa11.03□□□□□ -0.64
NHLRC3-202ENST00000379600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 CYP21A2P08686 494 aa11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 TEFQ10587 303 aa11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 MORC2Q9Y6X9 1032 aaPredicted RBP11.02□□□□□ -0.64
NHLRC3-202ENST00000379600 ABCC6O95255 1503 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms