RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 CRNKL1Q9BZJ0 848 aaKnown RBP12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
PTCHD1-201ENST00000379361 E7EVH7 732 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 IDEP14735 1019 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 NBPF6Q5VWK0 638 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 NBPF5PQ86XG9 351 aaPredicted RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 NBPF4Q96M43 638 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 ANKRD50Q9ULJ7 1429 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 FANCD2Q9BXW9 1451 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 HECW1Q76N89 1606 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 RBM10P98175 930 aaKnown RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 GOLGA1Q92805 767 aa12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
PTCHD1-201ENST00000379361 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 PPFIBP2Q8ND30 876 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 NINQ8N4C6 2090 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 ATP5DP30049 168 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 TSGA10Q9BZW7 698 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 JADE2Q9NQC1 790 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 KRT23Q9C075 422 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 BCAR3O75815 825 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 SPAG5Q96R06 1193 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 NOD1Q9Y239 953 aa12.74□□□□□ -0.37
PTCHD1-201ENST00000379361 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 GNAQP50148 359 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 AKR1B10O60218 316 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 CAVIN2O95810 425 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 CSRNP2Q9H175 543 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 MCM10Q7L590 875 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 ATRXP46100 2492 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 NACA2Q9H009 215 aa12.73□□□□□ -0.37
PTCHD1-201ENST00000379361 CALM1P0DP23 149 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 CALM2P0DP24 149 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 CALM3P0DP25 149 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 TMEM67Q5HYA8 995 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 ZNF804AQ7Z570 1209 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 HMG20BQ9P0W2 317 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 CDAN1Q8IWY9 1227 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 STAT6P42226 847 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 TACC1O75410 805 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 BOLA2Q9H3K6 86 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 CAMSAP2Q08AD1 1489 aa12.72□□□□□ -0.37
PTCHD1-201ENST00000379361 PLCG2P16885 1265 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 TMC6Q7Z403 805 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 CALML3P27482 149 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 RASA3Q14644 834 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 MX1P20591 662 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 SYCE3A1L190 88 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 STX10O60499 249 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 PLCB4Q15147 1175 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 CCDC125Q86Z20 511 aa12.71□□□□□ -0.37
PTCHD1-201ENST00000379361 VCX3BQ9H321 246 aa12.71□□□□□ -0.38
PTCHD1-201ENST00000379361 BICDL2A1A5D9 508 aa12.71□□□□□ -0.38
PTCHD1-201ENST00000379361 CYLC1P35663 651 aaPredicted RBP12.71□□□□□ -0.38
PTCHD1-201ENST00000379361 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
PTCHD1-201ENST00000379361 NBPF7P0C2Y1 421 aaPredicted RBP12.71□□□□□ -0.38
PTCHD1-201ENST00000379361 ERCC5P28715 1186 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms