RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 GOLGA6L22H0YM25 854 aa12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 PIP4K2AP48426 406 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-201ENST00000379340 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 ATG3Q9NT62 314 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.38
POLR2J3-201ENST00000379340 STARD3NLO95772 234 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 A1BGP04217 495 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 CUL4AQ13619 759 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 SIL1Q9H173 461 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 TRAK2O60296 914 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 ATP5JP18859 108 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 FOXO4P98177 505 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
POLR2J3-201ENST00000379340 ANKRD36CQ5JPF3 1778 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 EXOC5O00471 708 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 L1TD1Q5T7N2 865 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 PIGBQ92521 554 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 KCNB2Q92953 911 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 IL25Q9H293 177 aa12.63□□□□□ -0.39
POLR2J3-201ENST00000379340 SSFA2P28290 1259 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 ISY1Q9ULR0 285 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 SNX14Q9Y5W7 946 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 BTAF1O14981 1849 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
POLR2J3-201ENST00000379340 CICQ96RK0 1608 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 CIAO1O76071 339 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 TFCP2Q12800 502 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 TLR7Q9NYK1 1049 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
POLR2J3-201ENST00000379340 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 KCNQ4P56696 695 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 COL24A1Q17RW2 1714 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 BAG4O95429 457 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
POLR2J3-201ENST00000379340 EYA2O00167 538 aa12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 RNF20Q5VTR2 975 aa12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 MAP4K1Q92918 833 aa12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 TTC14Q96N46 770 aa12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
POLR2J3-201ENST00000379340 ZNF609O15014 1411 aa12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 ATG9AQ7Z3C6 839 aa12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 HAUS7Q99871 368 aa12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
POLR2J3-201ENST00000379340 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-201ENST00000379340 PSMA5P28066 241 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 350.4 ms