RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 MIPOL1Q8TD10 442 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 GPT2Q8TD30 523 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 CHMLP26374 656 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 AK2P54819 239 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 NAIF1Q69YI7 327 aaPredicted RBP13.58□□□□□ -0.24
NPHS1-202ENST00000378910 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 ECHDC1Q9NTX5 307 aa13.58□□□□□ -0.24
NPHS1-202ENST00000378910 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
NPHS1-202ENST00000378910 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 JPH2Q9BR39 696 aaPredicted RBP13.57□□□□□ -0.24
NPHS1-202ENST00000378910 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 CTNNA3Q9UI47 895 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 EBAG9O00559 213 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 KIF4AO95239 1232 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
NPHS1-202ENST00000378910 TRAF1Q13077 416 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 RHPN1Q8TCX5 695 aa13.57□□□□□ -0.24
NPHS1-202ENST00000378910 SRRTQ9BXP5 876 aaKnown RBP13.57□□□□□ -0.24
NPHS1-202ENST00000378910 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
NPHS1-202ENST00000378910 BIN1O00499 593 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 BRD1O95696 1058 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 BIN2Q9UBW5 565 aaPredicted RBP13.56□□□□□ -0.24
NPHS1-202ENST00000378910 ERICH2A1L162 156 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 MAFGO15525 162 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
NPHS1-202ENST00000378910 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 RWDD2BP57060 319 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
NPHS1-202ENST00000378910 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
NPHS1-202ENST00000378910 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 IBTKQ9P2D0 1353 aaPredicted RBP13.56□□□□□ -0.24
NPHS1-202ENST00000378910 CYP2C19P33261 490 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 KIF2CQ99661 725 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
NPHS1-202ENST00000378910 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ELF2Q15723 593 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 RINLQ6ZS11 566 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ITFG2Q969R8 447 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 SIRT1Q96EB6 747 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ARFGAP3Q9NP61 516 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 MKRN1Q9UHC7 482 aaKnown RBP13.55□□□□□ -0.24
NPHS1-202ENST00000378910 TULP2O00295 520 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 CHCHD3Q9NX63 227 aaKnown RBP13.55□□□□□ -0.24
NPHS1-202ENST00000378910 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
NPHS1-202ENST00000378910 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
NPHS1-202ENST00000378910 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
NPHS1-202ENST00000378910 VPS18Q9P253 973 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
NPHS1-202ENST00000378910 ABCD1P33897 745 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
NPHS1-202ENST00000378910 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 CCDC150Q8NCX0 1101 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 DNAI1Q9UI46 699 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 RANBP1P43487 201 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 GBP3Q9H0R5 595 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 INCENPQ9NQS7 918 aa13.54□□□□□ -0.24
NPHS1-202ENST00000378910 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 IDI1Q13907 227 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 RNF187Q5TA31 235 aaPredicted RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 CCDC181Q5TID7 509 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 ZNHIT6Q9NWK9 470 aaKnown RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 SRLQ86TD4 932 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 KIF4BQ2VIQ3 1234 aa13.53□□□□□ -0.24
NPHS1-202ENST00000378910 NOP2P46087 812 aaKnown RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 CCT2P78371 535 aaKnown RBP13.53□□□□□ -0.24
NPHS1-202ENST00000378910 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.24
NPHS1-202ENST00000378910 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.24
NPHS1-202ENST00000378910 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.24
NPHS1-202ENST00000378910 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.24
NPHS1-202ENST00000378910 GNG11P61952 73 aa13.52□□□□□ -0.25
NPHS1-202ENST00000378910 PSME1Q06323 249 aa13.52□□□□□ -0.25
NPHS1-202ENST00000378910 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
NPHS1-202ENST00000378910 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
NPHS1-202ENST00000378910 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms