RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 CTNNBL1Q8WYA6 563 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 ALS2CR12Q96Q35 445 aa13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 TERF1P54274 439 aa13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 MAP3K12Q12852 859 aa13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
PCDHA9-201ENST00000378122 GNG11P61952 73 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 GCOM1H8Y6P7 765 aaPredicted RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 MYZAPP0CAP1 466 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 HYPKQ9NX55 129 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 SLC5A1P13866 664 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 TMEM67Q5HYA8 995 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 MAATS1Q7Z4T9 603 aa13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-201ENST00000378122 GOLGA6L9A6NEM1 432 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 HLTFQ14527 1009 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 NOS1P29475 1434 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 SPTY2D1Q68D10 685 aaPredicted RBP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 JADE2Q9NQC1 790 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 TMEM266Q2M3C6 531 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 KIF20AO95235 890 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 VPS36Q86VN1 386 aa13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 MPHOSPH6Q99547 160 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-201ENST00000378122 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 LRRC2Q9BYS8 371 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 ORC3Q9UBD5 711 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 CAPN15O75808 1086 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 UBASH3AP57075 661 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 ZKSCAN5Q9Y2L8 839 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 ANAPC15P60006 121 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 CCDC186Q7Z3E2 898 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 A0A087WZG4 1122 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 PUF60Q9UHX1 559 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 V9GYY5 206 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 DESP17661 470 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 MICU3Q86XE3 530 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 IQCA1Q86XH1 822 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 SNRKQ9NRH2 765 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 IQSEC3Q9UPP2 1182 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-201ENST00000378122 GSTTP1A0A1W2PQM5 241 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 HSF2BPO75031 334 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 NSD2O96028 1365 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 GNPATO15228 680 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 SKILP12757 684 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 SPOUT1Q5T280 376 aaKnown RBP13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 ZBTB9Q96C00 473 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 DNAJC25Q9H1X3 360 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 DBF4Q9UBU7 674 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 ANKRD18BA2A2Z9 1011 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 TAF12Q16514 161 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 RSPH14Q9UHP6 348 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 PLB1Q6P1J6 1458 aa13.72□□□□□ -0.21
PCDHA9-201ENST00000378122 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 TTC12Q9H892 705 aaPredicted RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 PRPF4BQ13523 1007 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 ATP2C2O75185 946 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 FBLN1P23142 703 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 CETN2P41208 172 aa13.71□□□□□ -0.21
PCDHA9-201ENST00000378122 SYKP43405 635 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms