RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GRIPAP1Q4V328 841 aa14.78□□□□□ -0.04
SMARCE1-203ENST00000377808 DPP8Q6V1X1 898 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-203ENST00000377808 LARGE2Q8N3Y3 721 aa14.78□□□□□ -0.04
SMARCE1-203ENST00000377808 PPIP5K2O43314 1243 aa14.77□□□□□ -0.04
SMARCE1-203ENST00000377808 IGKV5-2P06315 115 aa14.77□□□□□ -0.04
SMARCE1-203ENST00000377808 SF3B3Q15393 1217 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-203ENST00000377808 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-203ENST00000377808 CELF1Q92879 486 aaKnown RBP14.77□□□□□ -0.04
SMARCE1-203ENST00000377808 ZNF521Q96K83 1311 aa14.77□□□□□ -0.05
SMARCE1-203ENST00000377808 ZNF541Q9H0D2 1346 aa14.77□□□□□ -0.05
SMARCE1-203ENST00000377808 PDE8AO60658 829 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 AOC3Q16853 763 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 CCDC152Q4G0S7 254 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 SP8Q8IXZ3 490 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 MPNDQ8N594 471 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 SUPT20HQ8NEM7 779 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 RBM46Q8TBY0 533 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 SNED1Q8TER0 1413 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 TAF1P21675 1872 aa14.76□□□□□ -0.05
SMARCE1-203ENST00000377808 NEURL1BA8MQ27 555 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 E9PSI1 815 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 HSPA6P17066 643 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 NIM1KQ8IY84 436 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 GJA3Q9Y6H8 435 aa14.75□□□□□ -0.05
SMARCE1-203ENST00000377808 WDR90Q96KV7 1748 aa14.74□□□□□ -0.05
SMARCE1-203ENST00000377808 F6X3S4 739 aa14.74□□□□□ -0.05
SMARCE1-203ENST00000377808 UBE3BQ7Z3V4 1068 aa14.74□□□□□ -0.05
SMARCE1-203ENST00000377808 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
SMARCE1-203ENST00000377808 SEC31BQ9NQW1 1179 aa14.74□□□□□ -0.05
SMARCE1-203ENST00000377808 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
SMARCE1-203ENST00000377808 FZD9O00144 591 aa14.73□□□□□ -0.05
SMARCE1-203ENST00000377808 CTSWP56202 376 aa14.73□□□□□ -0.05
SMARCE1-203ENST00000377808 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-203ENST00000377808 CDHR2Q9BYE9 1310 aa14.73□□□□□ -0.05
SMARCE1-203ENST00000377808 POTECB2RU33 542 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 COL4A5P29400 1685 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 RPS8P62241 208 aaKnown RBP14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 FSTL1Q12841 308 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 GCKRQ14397 625 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 SLC4A10Q6U841 1118 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 MIER1Q8N108 512 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 CDCA7LQ96GN5 454 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 CACNA1FO60840 1977 aa14.72□□□□□ -0.05
SMARCE1-203ENST00000377808 C6orf229H3BNL8 230 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 GPSM2P81274 684 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 SLFN5Q08AF3 891 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 EAPPQ56P03 285 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 LINS1Q8NG48 757 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 COL4A1P02462 1669 aa14.71□□□□□ -0.05
SMARCE1-203ENST00000377808 RIMBP2O15034 1052 aa14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 GPC2Q8N158 579 aa14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 CDC5LQ99459 802 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 RTFDC1Q9BY42 306 aaPredicted RBP14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
SMARCE1-203ENST00000377808 H7C1W4 665 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 LMOD1P29536 600 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 APLP1P51693 650 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 KIAA2012Q0VF49 1180 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 VPS33BQ9H267 617 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 GREM2Q9H772 168 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
SMARCE1-203ENST00000377808 UFL1O94874 794 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 WASHC4Q2M389 1173 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 TTLL11Q8NHH1 800 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 GPR101Q96P66 508 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 EYA3Q99504 573 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 ZNRF3Q9ULT6 936 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 CHMP3Q9Y3E7 222 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 DUOX1Q9NRD9 1551 aa14.68□□□□□ -0.06
SMARCE1-203ENST00000377808 G3V3G9 751 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 RAD17O75943 681 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 EPHX2P34913 555 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 DBNDD1Q9H9R9 158 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 POLLQ9UGP5 575 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 GGA1Q9UJY5 639 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 MYH3P11055 1940 aa14.67□□□□□ -0.06
SMARCE1-203ENST00000377808 HTRA3P83110 453 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 SRCIN1Q9C0H9 1055 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
SMARCE1-203ENST00000377808 C9orf78Q9NZ63 289 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms