RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
TCOF1-202ENST00000377797 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
TCOF1-202ENST00000377797 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
TCOF1-202ENST00000377797 TNNI3KQ59H18 835 aa17.06■□□□□ 0.32
TCOF1-202ENST00000377797 BRF1Q92994 677 aa17.06■□□□□ 0.32
TCOF1-202ENST00000377797 FPGT-TNNI3KV9GXZ4 949 aa17.06■□□□□ 0.32
TCOF1-202ENST00000377797 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 GJB2P29033 226 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 ZSCAN29Q8IWY8 852 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
TCOF1-202ENST00000377797 GOLGA8BA8MQT2 603 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
TCOF1-202ENST00000377797 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-202ENST00000377797 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 KDRP35968 1356 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 GNPATO15228 680 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 STX6O43752 255 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
TCOF1-202ENST00000377797 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
TCOF1-202ENST00000377797 GDPD2Q9HCC8 539 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 CDC42BPGQ6DT37 1551 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-202ENST00000377797 ITGA6P23229 1130 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
TCOF1-202ENST00000377797 PPFIA3O75145 1194 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 TPM3P06753 285 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 TCIRG1Q13488 830 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
TCOF1-202ENST00000377797 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.32
TCOF1-202ENST00000377797 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 AOX1Q06278 1338 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 WASF1Q92558 559 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
TCOF1-202ENST00000377797 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
TCOF1-202ENST00000377797 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.31
TCOF1-202ENST00000377797 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.31
TCOF1-202ENST00000377797 CCDC196A0A1B0GTZ2 297 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
TCOF1-202ENST00000377797 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 SYCE3A1L190 88 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 CYP7A1P22680 504 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 TRIM5Q9C035 493 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 PDE8AO60658 829 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 ST5P78524 1137 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 USP21Q9UK80 565 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 CCDC171Q6TFL3 1326 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 NUP62CLQ9H1M0 184 aa17.01■□□□□ 0.31
TCOF1-202ENST00000377797 CYP27B1O15528 508 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 TPM1P09493 284 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 MCM5P33992 734 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 ZNF287Q9HBT7 754 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
TCOF1-202ENST00000377797 SGSM2O43147 1006 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 TMEM67Q5HYA8 995 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 MICU3Q86XE3 530 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 RAD50Q92878 1312 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 CPS1P31327 1500 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 GOLGA8AA7E2F4 631 aa17■□□□□ 0.31
TCOF1-202ENST00000377797 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 TSR1Q2NL82 804 aaKnown RBP16.99■□□□□ 0.31
TCOF1-202ENST00000377797 TCEAL9Q9UHQ7 104 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 LDHCP07864 332 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 AK2P54819 239 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-202ENST00000377797 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
TCOF1-202ENST00000377797 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
TCOF1-202ENST00000377797 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
TCOF1-202ENST00000377797 TECPR2O15040 1411 aa16.98■□□□□ 0.31
TCOF1-202ENST00000377797 TPM2P07951 284 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms