RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
HIF3A-205ENST00000377670 ERLIN1O75477 346 aa12.54□□□□□ -0.4
HIF3A-205ENST00000377670 TRAF1Q13077 416 aa12.54□□□□□ -0.4
HIF3A-205ENST00000377670 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
HIF3A-205ENST00000377670 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
HIF3A-205ENST00000377670 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-205ENST00000377670 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 MYO6Q9UM54 1294 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 IL13P35225 146 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-205ENST00000377670 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 DEF6Q9H4E7 631 aa12.53□□□□□ -0.4
HIF3A-205ENST00000377670 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
HIF3A-205ENST00000377670 TSPY2A6NKD2 308 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 GOLIM4O00461 696 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 KRT32Q14532 448 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 PIK3R4Q99570 1358 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.4
HIF3A-205ENST00000377670 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 CCDC102AQ96A19 550 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 GCC2Q8IWJ2 1684 aa12.52□□□□□ -0.4
HIF3A-205ENST00000377670 RAB11FIP3O75154 756 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-205ENST00000377670 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-205ENST00000377670 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 KRT85P78386 507 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 H7C1D1 291 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 UQCRFS1P1P0C7P4 283 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
HIF3A-205ENST00000377670 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-205ENST00000377670 PIK3C2GO75747 1445 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 ME1P48163 572 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-205ENST00000377670 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 PTPRTO14522 1441 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 TTC16Q8NEE8 873 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
HIF3A-205ENST00000377670 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 ADGBQ8N7X0 1667 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 HAND2P61296 217 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 CGNQ9P2M7 1197 aaKnown RBP12.5□□□□□ -0.41
HIF3A-205ENST00000377670 SDSP20132 328 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
HIF3A-205ENST00000377670 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 NUCB1Q02818 461 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 METP08581 1390 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 USP8P40818 1118 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 CCDC181Q5TID7 509 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 IP6K1Q92551 441 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
HIF3A-205ENST00000377670 PRKG1Q13976 671 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 CCDC12Q8WUD4 166 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-205ENST00000377670 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 ARHGEF10O15013 1369 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 NCBP1Q09161 790 aaKnown RBP12.49□□□□□ -0.41
HIF3A-205ENST00000377670 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-205ENST00000377670 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 LMBR1LQ6UX01 489 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 LPXNO60711 386 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 SEC24BO95487 1268 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 ZNF213O14771 459 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 UBXN4Q92575 508 aa12.49□□□□□ -0.41
HIF3A-205ENST00000377670 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
HIF3A-205ENST00000377670 KIF5BP33176 963 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
HIF3A-205ENST00000377670 CBFA2T2O43439 604 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 TAF12Q16514 161 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 TMCO3Q6UWJ1 677 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 DPP8Q6V1X1 898 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-205ENST00000377670 CAMK4Q16566 473 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 PUS7Q96PZ0 661 aaKnown RBP12.48□□□□□ -0.41
HIF3A-205ENST00000377670 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 PLCG2P16885 1265 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms