RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 LAMB2P55268 1798 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 MYH3P11055 1940 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 APBB1O00213 710 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
CBWD3-203ENST00000377344 CSF1RP07333 972 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 GREM2Q9H772 168 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 PA2G4Q9UQ80 394 aaKnown RBP16.09■□□□□ 0.17
CBWD3-203ENST00000377344 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
CBWD3-203ENST00000377344 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.17
CBWD3-203ENST00000377344 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.17
CBWD3-203ENST00000377344 GCC1Q96CN9 775 aa16.08■□□□□ 0.17
CBWD3-203ENST00000377344 BCL11AQ9H165 835 aa16.08■□□□□ 0.17
CBWD3-203ENST00000377344 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.17
CBWD3-203ENST00000377344 ITGA6P23229 1130 aa16.08■□□□□ 0.16
CBWD3-203ENST00000377344 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-203ENST00000377344 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
CBWD3-203ENST00000377344 SIL1Q9H173 461 aa16.08■□□□□ 0.16
CBWD3-203ENST00000377344 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
CBWD3-203ENST00000377344 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
CBWD3-203ENST00000377344 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
CBWD3-203ENST00000377344 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
CBWD3-203ENST00000377344 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-203ENST00000377344 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-203ENST00000377344 PTPN12Q05209 780 aaKnown RBP16.05■□□□□ 0.16
CBWD3-203ENST00000377344 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
CBWD3-203ENST00000377344 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
CBWD3-203ENST00000377344 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
CBWD3-203ENST00000377344 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-203ENST00000377344 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
CBWD3-203ENST00000377344 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CBWD3-203ENST00000377344 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
CBWD3-203ENST00000377344 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
CBWD3-203ENST00000377344 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
CBWD3-203ENST00000377344 POLD1P28340 1107 aa16.04■□□□□ 0.16
CBWD3-203ENST00000377344 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
CBWD3-203ENST00000377344 COPRSQ9NQ92 184 aa16.04■□□□□ 0.16
CBWD3-203ENST00000377344 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
CBWD3-203ENST00000377344 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
CBWD3-203ENST00000377344 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
CBWD3-203ENST00000377344 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
CBWD3-203ENST00000377344 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 RAB11FIP3O75154 756 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 PDE6BP35913 854 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
CBWD3-203ENST00000377344 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
CBWD3-203ENST00000377344 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-203ENST00000377344 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
CBWD3-203ENST00000377344 NUCB1Q02818 461 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 LRRC24Q50LG9 513 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
CBWD3-203ENST00000377344 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 EYA2O00167 538 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
CBWD3-203ENST00000377344 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
CBWD3-203ENST00000377344 SKAP1Q86WV1 359 aa16■□□□□ 0.15
CBWD3-203ENST00000377344 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
CBWD3-203ENST00000377344 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
CBWD3-203ENST00000377344 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
CBWD3-203ENST00000377344 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-203ENST00000377344 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
CBWD3-203ENST00000377344 TAF1P21675 1872 aa15.99■□□□□ 0.15
CBWD3-203ENST00000377344 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-203ENST00000377344 CIAO1O76071 339 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 SASH1O94885 1247 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 SPEF2Q9C093 1822 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 H0YIN7 160 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
CBWD3-203ENST00000377344 TFCP2Q12800 502 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 GRAPQ13588 217 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-203ENST00000377344 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-203ENST00000377344 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
CBWD3-203ENST00000377344 SRGNP10124 158 aa15.97■□□□□ 0.15
CBWD3-203ENST00000377344 RGS3P49796 1198 aa15.97■□□□□ 0.15
CBWD3-203ENST00000377344 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
CBWD3-203ENST00000377344 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
CBWD3-203ENST00000377344 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
CBWD3-203ENST00000377344 COL4A1P02462 1669 aa15.97■□□□□ 0.15
CBWD3-203ENST00000377344 C10orf71Q711Q0 1435 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 SOCS7O14512 581 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 NPR1P16066 1061 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
CBWD3-203ENST00000377344 MASTLQ96GX5 879 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 CEP126Q9P2H0 1117 aa15.96■□□□□ 0.15
CBWD3-203ENST00000377344 RIPOR2Q9Y4F9 1068 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms