RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
CRNKL1-202ENST00000377340 PPIP5K2O43314 1243 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 ANKRD2Q9GZV1 360 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 TSPY2A6NKD2 308 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 UNC13BO14795 1591 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 NEURL1BA8MQ27 555 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 SOGA3Q5TF21 947 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 MPNDQ8N594 471 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 PKNOX2Q96KN3 472 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 PIK3C2BO00750 1634 aa10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 CEP170BQ9Y4F5 1589 aaPredicted RBP10.03□□□□□ -0.8
CRNKL1-202ENST00000377340 HIBADHP31937 336 aaKnown RBP10.02□□□□□ -0.8
CRNKL1-202ENST00000377340 IL6STP40189 918 aaPredicted RBP10.02□□□□□ -0.8
CRNKL1-202ENST00000377340 IQCA1Q86XH1 822 aa10.02□□□□□ -0.8
CRNKL1-202ENST00000377340 HLA-DOAP06340 250 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 PDRG1Q9NUG6 133 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 LDHBP07195 334 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 PDE6BP35913 854 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 R3HDM1Q15032 1099 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 CCDC144CPQ8IYA2 1237 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 CABP5Q9NP86 173 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 IFIT3O14879 490 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 VPS72Q15906 364 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 EAPPQ56P03 285 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 CRNKL1Q9BZJ0 848 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 SLC4A4Q9Y6R1 1079 aa10.02□□□□□ -0.81
CRNKL1-202ENST00000377340 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 ALDH1B1P30837 517 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 PDE1AP54750 535 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 TRMT1LQ7Z2T5 733 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 MAP3K15Q6ZN16 1313 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 EIF6P56537 245 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 MAGEB6Q8N7X4 407 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 RABEP1Q15276 862 aa10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 TPD52L1Q16890 204 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-202ENST00000377340 GOLGA6L6A8MZA4 724 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 NRDCO43847 1150 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 USP44Q9H0E7 712 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 GTF2IP78347 998 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
CRNKL1-202ENST00000377340 RTN4Q9NQC3 1192 aaKnown RBP10□□□□□ -0.81
CRNKL1-202ENST00000377340 PAG1Q9NWQ8 432 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 MCM9Q9NXL9 1143 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 KRT32Q14532 448 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 ZGPATQ8N5A5 531 aaKnown RBP10□□□□□ -0.81
CRNKL1-202ENST00000377340 SDSP20132 328 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 NIM1KQ8IY84 436 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 LRRC2Q9BYS8 371 aa10□□□□□ -0.81
CRNKL1-202ENST00000377340 CCT2P78371 535 aaKnown RBP9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 GSTO1P78417 241 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 SOS1Q07889 1333 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 CTCFLQ8NI51 663 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 GREM2Q9H772 168 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 GYG1P46976 350 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 PDE4BQ07343 736 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 TCP10Q12799 353 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 MFSD6Q6ZSS7 791 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 OTUD7AQ8TE49 926 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 XAGE2Q96GT9 111 aa9.99□□□□□ -0.81
CRNKL1-202ENST00000377340 NF2P35240 595 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 CTSWP56202 376 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 PUM3Q15397 648 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 HLFQ16534 295 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 KIAA0825Q8IV33 1275 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 SPATA31A1Q5TZJ5 1347 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 ZNF76P36508 570 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 PDE4CQ08493 712 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 LARP1BQ659C4 914 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 FERMT3Q86UX7 667 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 MICU3Q86XE3 530 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 CNKSR1Q969H4 720 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 DCTPP1Q9H773 170 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 FIBPO43427 364 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 GUCY1B3Q02153 619 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms