RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 H7C1W4 665 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 SNPHO15079 494 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 UBE3BQ7Z3V4 1068 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 DCTPP1Q9H773 170 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
SSX9-201ENST00000376909 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
SSX9-201ENST00000376909 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 GPTP24298 496 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 CASP7P55210 303 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 TRAPPC3LQ5T215 181 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 PPP1R42Q7Z4L9 355 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
SSX9-201ENST00000376909 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 LY75O60449 1722 aa9.67□□□□□ -0.86
SSX9-201ENST00000376909 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
SSX9-201ENST00000376909 ARFGEF2Q9Y6D5 1785 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 NUP188Q5SRE5 1749 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 SRGAP3O43295 1099 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 ZPR1O75312 459 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 PCCAP05165 728 aaPredicted RBP9.66□□□□□ -0.86
SSX9-201ENST00000376909 NUCB1Q02818 461 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 MTX1Q13505 466 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 PARP10Q53GL7 1025 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 ZBTB38Q8NAP3 1195 aaPredicted RBP9.66□□□□□ -0.86
SSX9-201ENST00000376909 SSH3Q8TE77 659 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
SSX9-201ENST00000376909 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
SSX9-201ENST00000376909 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
SSX9-201ENST00000376909 PHF14O94880 888 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 SSFA2P28290 1259 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 RFC4P35249 363 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 SF3B2Q13435 895 aaKnown RBP9.65□□□□□ -0.86
SSX9-201ENST00000376909 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.86
SSX9-201ENST00000376909 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 ANKRD45Q5TZF3 282 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 USPL1Q5W0Q7 1092 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 FAM89AQ96GI7 184 aa9.65□□□□□ -0.86
SSX9-201ENST00000376909 NIP7Q9Y221 180 aaKnown RBP eCLIP9.65□□□□□ -0.86
SSX9-201ENST00000376909 C4BP0C0L5 1744 aa9.65□□□□□ -0.87
SSX9-201ENST00000376909 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
SSX9-201ENST00000376909 RGS3P49796 1198 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
SSX9-201ENST00000376909 SUSD4Q5VX71 490 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
SSX9-201ENST00000376909 PLA2G12BQ9BX93 195 aa9.64□□□□□ -0.87
SSX9-201ENST00000376909 SRP68Q9UHB9 627 aaKnown RBP9.64□□□□□ -0.87
SSX9-201ENST00000376909 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
SSX9-201ENST00000376909 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
SSX9-201ENST00000376909 RAB11FIP3O75154 756 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
SSX9-201ENST00000376909 FOXO4P98177 505 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 HSP90AB4PQ58FF6 505 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 LMBR1LQ6UX01 489 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 CAMKK2Q96RR4 588 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 LNPKQ9C0E8 428 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 TFCP2L1Q9NZI6 479 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
SSX9-201ENST00000376909 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 USP42Q9H9J4 1324 aaKnown RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 APBB1O00213 710 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 IRS4O14654 1257 aaPredicted RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 HSP90B1P14625 803 aaKnown RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 BAG6P46379 1132 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 EN1Q05925 392 aaPredicted RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 EZH2Q15910 746 aaKnown RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 TBC1D9BQ66K14 1250 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 BICDL1Q6ZP65 573 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
SSX9-201ENST00000376909 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
SSX9-201ENST00000376909 PDE8AO60658 829 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 NTSR2O95665 410 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 PDE4AP27815 886 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 G3BP1Q13283 466 aaKnown RBP eCLIP9.61□□□□□ -0.87
SSX9-201ENST00000376909 OS9Q13438 667 aaPredicted RBP9.61□□□□□ -0.87
SSX9-201ENST00000376909 ZNF827Q17R98 1081 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
SSX9-201ENST00000376909 PA2G4Q9UQ80 394 aaKnown RBP9.61□□□□□ -0.87
SSX9-201ENST00000376909 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
SSX9-201ENST00000376909 TNS1Q9HBL0 1735 aaKnown RBP9.6□□□□□ -0.87
SSX9-201ENST00000376909 SMARCA5O60264 1052 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms