RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 SNED1Q8TER0 1413 aa28.64■■■□□ 2.18
YIF1A-202ENST00000376899 CCT4P50991 539 aaKnown RBP28.64■■■□□ 2.18
YIF1A-202ENST00000376899 GRAPQ13588 217 aa28.64■■■□□ 2.18
YIF1A-202ENST00000376899 ATF7IPQ6VMQ6 1270 aa28.64■■■□□ 2.18
YIF1A-202ENST00000376899 ARHGAP27Q6ZUM4 889 aa28.64■■■□□ 2.18
YIF1A-202ENST00000376899 GRAPLQ8TC17 118 aaPredicted RBP28.64■■■□□ 2.18
YIF1A-202ENST00000376899 RTL9Q8NET4 1388 aa28.63■■■□□ 2.17
YIF1A-202ENST00000376899 TRIM27P14373 513 aa28.63■■■□□ 2.17
YIF1A-202ENST00000376899 CCDC152Q4G0S7 254 aa28.63■■■□□ 2.17
YIF1A-202ENST00000376899 C9orf78Q9NZ63 289 aaPredicted RBP28.63■■■□□ 2.17
YIF1A-202ENST00000376899 LRRC37AA6NMS7 1700 aa28.63■■■□□ 2.17
YIF1A-202ENST00000376899 TTLL11Q8NHH1 800 aa28.62■■■□□ 2.17
YIF1A-202ENST00000376899 FRAT1Q92837 279 aaPredicted RBP28.62■■■□□ 2.17
YIF1A-202ENST00000376899 ZNF219Q9P2Y4 722 aaPredicted RBP28.62■■■□□ 2.17
YIF1A-202ENST00000376899 PPEF1O14829 653 aaPredicted RBP28.61■■■□□ 2.17
YIF1A-202ENST00000376899 BBOX1O75936 387 aa28.61■■■□□ 2.17
YIF1A-202ENST00000376899 CCDC93Q567U6 631 aa28.61■■■□□ 2.17
YIF1A-202ENST00000376899 ZKSCAN2Q63HK3 967 aa28.61■■■□□ 2.17
YIF1A-202ENST00000376899 NFKBIEO00221 500 aa28.6■■■□□ 2.17
YIF1A-202ENST00000376899 CC2D2BQ6DHV5 1058 aa28.6■■■□□ 2.17
YIF1A-202ENST00000376899 LTBP3Q9NS15 1303 aa28.6■■■□□ 2.17
YIF1A-202ENST00000376899 UTRNP46939 3433 aa28.59■■■□□ 2.17
YIF1A-202ENST00000376899 CSF1RP07333 972 aa28.59■■■□□ 2.17
YIF1A-202ENST00000376899 INTS3Q68E01 1043 aaKnown RBP28.59■■■□□ 2.17
YIF1A-202ENST00000376899 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
YIF1A-202ENST00000376899 TNNQ9UQP3 1299 aa28.59■■■□□ 2.17
YIF1A-202ENST00000376899 CCDC88AQ3V6T2 1871 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 NBPF7P0C2Y1 421 aaPredicted RBP28.58■■■□□ 2.17
YIF1A-202ENST00000376899 FOXO4P98177 505 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 OLFM4Q6UX06 510 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 TMC4Q7Z404 712 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
YIF1A-202ENST00000376899 USP44Q9H0E7 712 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 ATP6V0A2Q9Y487 856 aa28.58■■■□□ 2.17
YIF1A-202ENST00000376899 SEC31BQ9NQW1 1179 aa28.57■■■□□ 2.16
YIF1A-202ENST00000376899 RASSF7Q02833 373 aa28.56■■■□□ 2.16
YIF1A-202ENST00000376899 SUCLG2Q96I99 432 aa28.56■■■□□ 2.16
YIF1A-202ENST00000376899 CCDC85AQ96PX6 553 aaPredicted RBP28.56■■■□□ 2.16
YIF1A-202ENST00000376899 GREM2Q9H772 168 aa28.56■■■□□ 2.16
YIF1A-202ENST00000376899 DICER1Q9UPY3 1922 aaKnown RBP28.55■■■□□ 2.16
YIF1A-202ENST00000376899 GRIPAP1Q4V328 841 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 EPHA10Q5JZY3 1008 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 SLC51AQ86UW1 340 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 SP8Q8IXZ3 490 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 KAZALD1Q96I82 304 aa28.55■■■□□ 2.16
YIF1A-202ENST00000376899 RPS8P62241 208 aaKnown RBP28.54■■■□□ 2.16
YIF1A-202ENST00000376899 TAOK3Q9H2K8 898 aa28.54■■■□□ 2.16
YIF1A-202ENST00000376899 SPEF2Q9C093 1822 aa28.54■■■□□ 2.16
YIF1A-202ENST00000376899 PRELPP51888 382 aa28.53■■■□□ 2.16
YIF1A-202ENST00000376899 FKBP4Q02790 459 aaKnown RBP eCLIP28.53■■■□□ 2.16
YIF1A-202ENST00000376899 LTBP1Q14766 1721 aa28.52■■■□□ 2.16
YIF1A-202ENST00000376899 FAM161AQ3B820 660 aa28.52■■■□□ 2.16
YIF1A-202ENST00000376899 CLUAP1Q96AJ1 413 aa28.52■■■□□ 2.16
YIF1A-202ENST00000376899 CDC5LQ99459 802 aaKnown RBP28.52■■■□□ 2.16
YIF1A-202ENST00000376899 LMNB1P20700 586 aa28.51■■■□□ 2.15
YIF1A-202ENST00000376899 PSMD1Q99460 953 aa28.51■■■□□ 2.15
YIF1A-202ENST00000376899 ITGA6P23229 1130 aa28.5■■■□□ 2.15
YIF1A-202ENST00000376899 RABL6Q3YEC7 729 aaPredicted RBP28.5■■■□□ 2.15
YIF1A-202ENST00000376899 LMBR1LQ6UX01 489 aa28.5■■■□□ 2.15
YIF1A-202ENST00000376899 ANKRD18AQ8IVF6 992 aa28.5■■■□□ 2.15
YIF1A-202ENST00000376899 DZIP1LQ8IYY4 767 aaKnown RBP28.5■■■□□ 2.15
YIF1A-202ENST00000376899 DUOX1Q9NRD9 1551 aa28.5■■■□□ 2.15
YIF1A-202ENST00000376899 TIAM2Q8IVF5 1701 aa28.49■■■□□ 2.15
YIF1A-202ENST00000376899 C9orf131Q5VYM1 1079 aa28.49■■■□□ 2.15
YIF1A-202ENST00000376899 TMEM57Q8N5G2 664 aa28.49■■■□□ 2.15
YIF1A-202ENST00000376899 TMX4Q9H1E5 349 aaPredicted RBP28.49■■■□□ 2.15
YIF1A-202ENST00000376899 YY1P25490 414 aa28.48■■■□□ 2.15
YIF1A-202ENST00000376899 ANKRD44Q8N8A2 993 aa28.48■■■□□ 2.15
YIF1A-202ENST00000376899 MEIS3Q99687 375 aa28.48■■■□□ 2.15
YIF1A-202ENST00000376899 BICC1Q9H694 974 aaKnown RBP28.48■■■□□ 2.15
YIF1A-202ENST00000376899 UBTFL1P0CB47 393 aaPredicted RBP28.47■■■□□ 2.15
YIF1A-202ENST00000376899 RLBP1P12271 317 aa28.47■■■□□ 2.15
YIF1A-202ENST00000376899 FTSJ3Q8IY81 847 aaKnown RBP28.47■■■□□ 2.15
YIF1A-202ENST00000376899 RTFDC1Q9BY42 306 aaPredicted RBP28.47■■■□□ 2.15
YIF1A-202ENST00000376899 RNF181Q9P0P0 153 aa28.47■■■□□ 2.15
YIF1A-202ENST00000376899 ANKRD18BA2A2Z9 1011 aa28.46■■■□□ 2.15
YIF1A-202ENST00000376899 IFIT5Q13325 482 aaKnown RBP28.45■■■□□ 2.14
YIF1A-202ENST00000376899 MPNDQ8N594 471 aa28.45■■■□□ 2.14
YIF1A-202ENST00000376899 BSDC1Q9NW68 430 aaPredicted RBP28.45■■■□□ 2.14
YIF1A-202ENST00000376899 HDAC5Q9UQL6 1122 aa28.45■■■□□ 2.14
YIF1A-202ENST00000376899 CHMP3Q9Y3E7 222 aa28.45■■■□□ 2.14
YIF1A-202ENST00000376899 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
YIF1A-202ENST00000376899 GNAI3P08754 354 aa28.44■■■□□ 2.14
YIF1A-202ENST00000376899 A0A1B0GUL6 1792 aa28.43■■■□□ 2.14
YIF1A-202ENST00000376899 MS4A1P11836 297 aa28.43■■■□□ 2.14
YIF1A-202ENST00000376899 IGHMBP2P38935 993 aaKnown RBP28.43■■■□□ 2.14
YIF1A-202ENST00000376899 DPP8Q6V1X1 898 aaPredicted RBP28.43■■■□□ 2.14
YIF1A-202ENST00000376899 ZNF277Q9NRM2 450 aaPredicted RBP28.43■■■□□ 2.14
YIF1A-202ENST00000376899 CCDC57Q2TAC2 916 aa28.42■■■□□ 2.14
YIF1A-202ENST00000376899 SUPT20HQ8NEM7 779 aa28.42■■■□□ 2.14
YIF1A-202ENST00000376899 PODXL2Q9NZ53 605 aa28.42■■■□□ 2.14
YIF1A-202ENST00000376899 IARSP41252 1262 aaKnown RBP28.41■■■□□ 2.14
YIF1A-202ENST00000376899 GPSM2P81274 684 aa28.41■■■□□ 2.14
YIF1A-202ENST00000376899 VPS33BQ9H267 617 aa28.41■■■□□ 2.14
YIF1A-202ENST00000376899 MINPP1Q9UNW1 487 aa28.4■■■□□ 2.14
YIF1A-202ENST00000376899 LRRFIP2Q9Y608 721 aaKnown RBP28.4■■■□□ 2.14
YIF1A-202ENST00000376899 COL4A5P29400 1685 aa28.39■■■□□ 2.14
YIF1A-202ENST00000376899 ITPRIPQ8IWB1 547 aa28.39■■■□□ 2.14
YIF1A-202ENST00000376899 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms